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open access

Genome-Resolved Proteomic Stable Isotope Probing of Soil Microbial Communities Using 13CO2 and 13C-Methanol

Description: Article describes experiment where proteomic sable isotope probing (SIP) was combined with targeted metagenomic binning to reconstruct metagenome-assembled genomes (MAGs) of the microorganisms producing labeled proteins. Carbon flows were tracked from 13CO2 to the rhizosphere communities of Zea mays, Triticum aestivum, and Arabidopsis thaliana.
Date: December 6, 2019
Creator: Li, Zhou; Yao, Qiuming; Guo, Xuan; Crits-Christoph, Alexander; Mayes, Melanie A.; Hervey, William Judson IV et al.
Partner: UNT College of Engineering
open access

3D-FHNet: Three-Dimensional Fusion Hierarchical Reconstruction Method for Any Number of Views

Description: Article proposes a three-dimensional fusion hierarchical reconstruction method that utilizes a multi-view feature combination method and a hierarchical prediction strategy to unify the single view and any number of multiple views 3D reconstructions.
Date: November 22, 2019
Creator: Lu, Qiang; Lu, Yiyang; Xiao, Mingjie; Yuan, Xiaohui & Jia, Wei
Partner: UNT College of Engineering
open access

Integrating multi-omics datasets to infer phenotype-specific driver genes, regulatory interactions and drug response

Description: Data management plan for the grant "Integrating multi-omics datasets to infer phenotype-specific driver genes, regulatory interactions and drug response." Research to develop open source integrative computational tools that perform secondary analysis of publicly available multi-omics biological, clinical and environmental exposure datasets to infer context-specific regulatory interactions and modules, and to predict disease associated genes and patient-specific drug response.
Date: 2019-08-01/2024-06-30
Creator: Bozdag, Serdar
Partner: UNT College of Engineering
open access

A Corpus of Negations and their Underlying Positive Interpretations

Description: Article presenting a corpus of negations and their underlying positive interpretations using negations from Simple Wikipedia, automatically generating potential positive interpretations, and collecting manual annotations that effectively rewrite the negation in positive terms. This article was presented at the Eighth Joint Conference on Lexical and Computational Semantics (SEM 2019) in Minneapolis, Minnesota, June 6-7, 2019.
Date: June 2019
Creator: Sarabi, Zahra; Killian, Erin; Blanco, Eduardo & Palmer, Alexis
Partner: University of North Texas
open access

Incorporating Emoji Descriptions Improves Tweet Classification

Description: Article presenting a simple strategy to process emojis in Tweets: replace them with their natural language description and use pretrained word embeddings as normally done with standard words. Results show that this strategy is more effective than using pretrained emoji embeddings for tweet classification.
Date: June 2019
Creator: Singh, Abhishek K.; Blanco, Eduardo & Jin, Wei
Partner: UNT College of Engineering
open access

Fabric Defect Detection Using Activation Layer Embedded Convolutional Neural Network

Description: This article develops a deep-learning algorithm for an on-loom fabric defect inspection system by combining the techniques of image pre-processing, fabric motif determination, candidate defect map generation, and convolutional neural networks (CNNs).
Date: April 29, 2019
Creator: Ouyang, Wenbin; Xu, Bugao; Hou, Jue & Yuan, Xiaohui
Partner: UNT College of Engineering
open access

Bayesian analysis of complex mutations in HBV, HCV, and HIV studies

Description: This article provides a review of the Bayesian-inference-based methods applied to Hepatitis B Virus (HBV), Hepatitis C Virus (HCV), and Human Immunodeficiency Virus (HIV) studies with a focus on the detection of the viral mutations and various problems which are correlated to these mutations. The authors also provide a summary of the Bayesian methods' applications toward these viruses' studies, where several important and useful results have been discovered.
Date: April 4, 2019
Creator: Guo, Xuan; Liu, Bing; Feng, Shishi & Zhang, Jing
Partner: UNT College of Engineering
transcript

Episode 12: Dr. Ryan Garlick

Description: Interview with Dr. Ryan Garlick for the Osher Lifelong Learning Institute (OLLI) podcast. In this episode, Susan speaks with Dr. Ryan Garlick, Principal Lecturer in UNT's Department of Computer Science and Engineering. They discuss his codebreaking work, including his participation in TV programs such as National Geographic's "Hunt for the Zodiac Killer." Dr. Garlick gives an overview of the codebreaking methods that are being used to decipher the Zodiac's mysterious messages and also talks abo… more
Date: February 28, 2019
Duration: 24 minutes 39 seconds
Creator: Supak, Susan & Garlick, Ryan
Partner: UNT Libraries Special Collections
open access

Automated extraction of attributes from natural language attribute-based access control (ABAC) Policies

Description: Article (1) developing a practical framework to extract authorization attributes of hierarchical ABAC system from natural language artifacts, and (2) generating a set of realistic synthetic natural language access control policies (NLACPs) to evaluate the proposed framework.
Date: January 21, 2019
Creator: Alohaly, Manar; Takabi, Hassan & Blanco, Eduardo
Partner: UNT College of Engineering
captions transcript

Context-Aware Testing for Android Applications

Description: Video from the Fall 2018 3 Minute Thesis (3MT®) Final Competition. In this video, Shraddha Piparia presents her research methods, findings, and its significance in non-technical language.
Date: November 17, 2018
Duration: 2 minutes 57 seconds
Creator: Piparia, Shraddha
Partner: UNT College of Engineering
captions transcript

Skin Detection in Image and Video

Description: Video from the Fall 2018 3 Minute Thesis (3MT®) Final Competition. In this video, ABM Rezbaul Islam presents his research methods, findings, and its significance in non-technical language.
Date: November 17, 2018
Duration: 3 minutes 15 seconds
Creator: Islam, A. B. M. Rezbaul
Partner: UNT College of Engineering
open access

A Performance Conserving Approach for Reducing Memory Power Consumption in Multi-Core Systems

Description: Article proposes a strategy called Dynamic Bank Partitioning (DBP), which allocates memory banks to different applications based on their memory access characteristic, and also proposes an adaptive method to dynamically select an optimal page policy for each bank according to the characteristics of memory accesses that each bank receives to further reduce power consumption.
Date: August 29, 2018
Creator: Juan Fang; Lu, Jiajia; Wang, Mengxuan & Zhao, Hui
Partner: UNT College of Engineering
open access

Modeling the 2013 Zika Outbreak in French Polynesia: Intervention Strategies

Description: Paper presents a model that simulates the 2013–2014 French Polynesia Zika outbreak, incorporating the temperature dependent mosquito ecology and the local transit network (flights and ferries), highlighting the importance of human travel patterns and mosquito population dynamics in a disease outbreak.
Date: August 24, 2018
Creator: Gwalani, Harsha; Hawamdeh, Faris; Mikler, Armin R. & Xiong, Katherine
Partner: UNT College of Engineering
open access

Annotating If Authors of Tweets are Located in the Locations They Tweet About

Description: Article presented at the Eleventh International Conference on Language Resources and Evaluation (LREC 2018). The study investigates spatial information of tweets whereby the authors present a corpus of tweets annotated with temporally-anchored spatial information involving the author.
Date: May 2018
Creator: Doudagiri, Vivek; Vempala, Alakananda & Blanco, Eduardo
Partner: UNT College of Engineering
open access

A Corpus of Metaphor Novelty Scores for Syntactically-Related Word Pairs

Description: Article introduces a large corpus of metaphor novelty scores for syntactically related word pairs, and releases it freely to the research community. This article describes the corpus, includes an analysis of its score distribution and the types of word pairs included in the corpus, and provides a brief overview of standard metaphor detection corpora.
Date: May 2018
Creator: Parde, Natalie & Nielsen, Rodney D.
Partner: UNT College of Engineering
open access

On the security of the Courtois-Finiasz-Sendrier signature

Description: This article proves that a variant of the Courtois-Finiasz-Sendrier signature is strongly existentially unforgeable under chosen message attack in the random oracle model, assuming hardness of the Permuted Goppa Syndrome Decoding Problem (also known as the Niederreiter problem).
Date: March 20, 2018
Creator: Morozov, Kirill; Roy, Partha Sarathi; Steinwandt, Rainer & Xu, Rui
Partner: UNT College of Engineering
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