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Comparative Genomics Analysis and Phenotypic Characterization of Shewanella putrefaciens W3-18-1: Anaerobic Respiration, Bacterial Microcompartments, and Lateral Flagella

Description: Respiratory versatility and psychrophily are the hallmarks of Shewanella. The ability to utilize a wide range of electron acceptors for respiration is due to the large number of c-type cytochrome genes present in the genome of Shewanella strains. More recently the dissimilatory metal reduction of Shewanella species has been extensively and intensively studied for potential applications in the bioremediation of radioactive wastes of groundwater and subsurface environments. Multiple Shewanella ge… more
Date: May 17, 2010
Creator: Qiu, D.; Tu, Q.; He, Zhili & Zhou, Jizhong
Item Type: Refine your search to only Report
Partner: UNT Libraries Government Documents Department
open access

GeoChip 3.0 as a high-thoughput tool for analyzing microbial community composition, structure, and functional activity

Description: A new generation of functional gene arrays (FGAs; GeoChip 3.0) has been developed, with {approx}28,000 probes covering approximately 57,000 gene variants from 292 functional gene families involved in carbon, nitrogen, phosphorus and sulfur cycles, energy metabolism, antibiotic resistance, metal resistance and organic contaminant degradation. GeoChip 3.0 also has several other distinct features, such as a common oligo reference standard (CORS) for data normalization and comparison, a software pa… more
Date: April 1, 2010
Creator: He, Z.; Deng, Y.; Van Nostrand, J.D.; Tu, Q.; Xu, M.; Hemme, C.L. et al.
Item Type: Refine your search to only Article
Partner: UNT Libraries Government Documents Department

HuMiChip: Development of a Functional Gene Array for the Study of Human Microbiomes

Description: Microbiomes play very important roles in terms of nutrition, health and disease by interacting with their hosts. Based on sequence data currently available in public domains, we have developed a functional gene array to monitor both organismal and functional gene profiles of normal microbiota in human and mouse hosts, and such an array is called human and mouse microbiota array, HMM-Chip. First, seed sequences were identified from KEGG databases, and used to construct a seed database (seedDB) c… more
Date: May 17, 2010
Creator: Tu, Q.; Deng, Ye; Lin, Lu; Hemme, Chris L.; He, Zhili & Zhou, Jizhong
Item Type: Refine your search to only Poster
Partner: UNT Libraries Government Documents Department
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