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A Computer Assisted Micro-Dye Uptake Interferon Assay System

Description: A new rapid computer assisted micro-titer plate interferon assay system was developed and characterized for use in high capacity clinical and research applications. The biological aspect of the assay was a modification of the assay methods of Finter, Armstrong and McManus. It was an application of spectrophotometric quantification of the reduction of viral cytopathic effect (CPE) as reflected by neutral red dye uptake by viable cells. A computer program was developed for the extrapolation of raw data to reference interferon units.
Date: August 1981
Creator: Duvall, John C.
Partner: UNT Libraries

Studies on actomyosin crossbridge flexibility using a new single molecule assay.

Description: Several key flexure sites exist in the muscle crossbridge including the actomyosin binding site which play important roles in the actomyosin crossbridge cycle. To distinguish between these sources of flexibility, a new single molecule assay was developed to observe the swiveling of rod about a single myosin. Myosins attached through a single crossbridge displayed mostly similar torsional characteristics compared to myosins attached through two crossbridges, which indicates that most of the torsional flexibility resides in the myosin subfragment-2, and thus the hinge between subfragment-2 and light meromyosin should contribute the most to this flexibility. The comparison of torsional characteristics in the absence and presence of ADP demonstrated a small but significant increase in twist rates for the double-headed myosins but no increase for single-headed myosins, which indicates that the ADP-induced increase in flexibility arises due to changes in the myosin head and verifies that most flexibility resides in myosin subfragment-2.
Date: May 2004
Creator: Gundapaneni, Deepika
Partner: UNT Libraries

MPACT Fast Neutron Multiplicity System Design Concepts

Description: This report documents work performed by Idaho National Laboratory and the University of Michigan in fiscal year (FY) 2012 to examine design parameters related to the use of fast-neutron multiplicity counting for assaying plutonium for materials protection, accountancy, and control purposes. This project seeks to develop a new type of neutron-measurement-based plutonium assay instrument suited for assaying advanced fuel cycle materials. Some current-concept advanced fuels contain high concentrations of plutonium; some of these concept fuels also contain other fissionable actinides besides plutonium. Because of these attributes the neutron emission rates of these new fuels may be much higher, and more difficult to interpret, than measurements made of plutonium-only materials. Fast neutron multiplicity analysis is one approach for assaying these advanced nuclear fuels. Studies have been performed to assess the conceptual performance capabilities of a fast-neutron multiplicity counter for assaying plutonium. Comparisons have been made to evaluate the potential improvements and benefits of fast-neutron multiplicity analyses versus traditional thermal-neutron counting systems. Fast-neutron instrumentation, using for example an array of liquid scintillators such as EJ-309, have the potential to either a) significantly reduce assay measurement times versus traditional approaches, for comparable measurement precision values, b) significantly improve assay precision values, for measurement durations comparable to current-generation technology, or c) moderating improve both measurement precision and measurement durations versus current-generation technology. Using the MCNPX-PoliMi Monte Carlo simulation code, studies have been performed to assess the doubles-detection efficiency for a variety of counter layouts of cylindrical liquid scintillator detector cells over one, two, and three rows. Ignoring other considerations, the best detector design is the one with the most detecting volume. However, operational limitations guide a) the maximum acceptable size of each detector cell (due to PSD performance and maximum-acceptable per-channel data throughput rates, limited by pulse pile-up and the processing rate of the ...
Date: October 1, 2012
Creator: Chichester, D. L.; Pozzi, S. A.; Dolan, J. L.; Kinlaw, M. T.; Kaplan, A. C.; Flaska, M. et al.
Partner: UNT Libraries Government Documents Department

An Assay Method for Determining Extra-Cellular Lipases from Pseudomonas aeruginosa

Description: The applicability of an isotopically labelled assay system to determine the lipase production in Pseudomonas aeruginosa was evaluated. Supernatant from cultures of Pseudomonas aeruginosa grown in a medium containing olive oil was incubated with a substrate containing labelled trioleate. Fatty acids were isolated by means of a liquid-liquid partition system. Enzyme activity was determined by measuring the amounts of free fatty acid by liquid scintillation counting. Findings indicate that the isotopicallylabelled, liquid-liquid partitioning assay is reliable, sensitive and adaptable to rapid assay conditions. It was also determined that different strains of Pseudomonas aeruginosa produce varying amounts of lipase. Partial purification of supernatant by gel filtration produced two protein peaks showing enzymatic activity.
Date: May 1978
Creator: Christensen, John N.
Partner: UNT Libraries

Does Downhill Running Alter Monocyte Susceptibility to Apoptosis?

Description: Introduction/purpose: Recovery from muscle damage involves a type of programmed cell death known as apoptosis. Damage Associated Molecular Patterns (DAMPs) are released after muscle damage and may cause premature apoptosis in monocytes infiltrating the damaged site. This may alter the time course of events towards recovery. Therefore, the purpose of this study was to investigate if downhill running causes a change in the susceptibility of monocytes to apoptosis. Methods: Participants (5 male, 6 female) completed a downhill running protocol consisting of 6-5 minute bouts at a speed of 6-9mph on a -15% grade treadmill. Venous blood samples were collected immediately pre-exercise (PRE), in addition to 4 -h, 24 -h and 48 -h post-exercise. Creatine kinase (CK) was measured to give an indication of muscle damage. Monocytes were analyzed by flow cytometry for expression of multicaspase and annexin v reagent was used to detect changes in the plasma membrane. A MILLIPLEX MAP human early apoptosis magnetic bead 7-plex kit (EMD Millipore, Billerica, MA) was used to assess the relative concentration of phosphorylated protein kinase B (Akt), Bcl-2 associated death promoter (BAD), B cell lymphoma-2 (Bcl-2), active caspase-8, active caspase-9, c jun N terminal kinase (JNK) and tumor protein p53 by Luminex multiplex assay. Results: CK peaked at 24- h. Monocytes showed greater expression of multicaspase at 24 –h and 48 -h than at PRE. Bcl-2, p53 and caspase-8 were all significantly greater at 24 –h than at PRE. Conclusion: Downhill running did alter the apoptotic response of monocytes and therefore may be important in the recovery process from muscle damage.
Date: August 2016
Creator: Pennel, Kathryn Ann Foster
Partner: UNT Libraries

Review of Destructive Assay Methods for Nuclear Materials Characterization from the Three Mile Island (TMI) Fuel Debris

Description: This report provides a summary of the literature review that was performed and based on previous work performed at the Idaho National Laboratory studying the Three Mile Island 2 (TMI-2) nuclear reactor accident, specifically the melted fuel debris. The purpose of the literature review was to document prior published work that supports the feasibility of the analytical techniques that were developed to provide quantitative results of the make-up of the fuel and reactor component debris located inside and outside the containment. The quantitative analysis provides a technique to perform nuclear fuel accountancy measurements
Date: September 1, 2013
Creator: Miller, Carla J.
Partner: UNT Libraries Government Documents Department

Uncertainty Analysis of Nondestructive Assay Measurements of Nuclear Waste

Description: Regulatory agencies governing the disposal of nuclear waste require that the waste be appropriately characterized prior to disposition. The most important aspect of the characterization process, establishing radionuclide content, is often achieved by nondestructive assay (NDA). For NDA systems to be approved for use in these applications, measurement uncertainty must be established. Standard “propagation of errors” methods provide a good starting point for considering the uncertainty analysis of NDA systems for nuclear waste. However, as compared with other applications (e.g., nuclear material accountability), using NDA systems for nuclear waste measurements presents some unique challenges. These challenges, stemming primarily from the diverse nature of the waste materials encountered, carry over into the uncertainty analysis as well. This paper reviews performance measures appropriate for the assessment of NDA uncertainty, describes characteristics of nuclear waste measurements that contribute to difficulties in assessing uncertainty, and outlines some statistics based methods for incorporating variability in waste characteristics in an uncertainty analysis.
Date: November 1, 1998
Creator: Blackwood, Larry Gene & Harker, Yale Deon
Partner: UNT Libraries Government Documents Department

Majorana DUSEL R&D Final Report

Description: This report summarizes the work performed at PNNL under the project Majorana Neutrinoless Double Beta Decay DUSEL R&D over the period of FY07-FY09.
Date: September 21, 2010
Creator: Fast, James E.; Hoppe, Eric W.; Mintzer, Esther E.; Aalseth, Craig E.; Day, Anthony R.; Gerlach, David C. et al.
Partner: UNT Libraries Government Documents Department

Development and Implementation of an Assay System for Rapid Screening of Transuranic Waste in Highly Contaminated Environments

Description: An overview of the Fissile Material Monitor Waste Screener (FMM-WS) System is presented. This system is a multifunctional radioactive waste assay system suitable for the rapid assay of highly contaminated transuranic wastes immediately after retrieval, prior to packaging. The FMM-WS was developed for use at the Accelerated Cleanup Project (ARP) and began initial testing and operation in April 2008. The FMM-WS is currently in use and is providing needed data on transuranic (TRU) wastes with a range of material types, volumes, and densities from the Accelerated Retrieval Project (ARP).
Date: August 1, 2010
Creator: Akers, Douglas; Salomon, Hopi & Robal, Lyle
Partner: UNT Libraries Government Documents Department

Automated UF6 Cylinder Enrichment Assay: Status of the Hybrid Enrichment Verification Array (HEVA) Project: POTAS Phase II

Description: Pacific Northwest National Laboratory (PNNL) intends to automate the UF6 cylinder nondestructive assay (NDA) verification currently performed by the International Atomic Energy Agency (IAEA) at enrichment plants. PNNL is proposing the installation of a portal monitor at a key measurement point to positively identify each cylinder, measure its mass and enrichment, store the data along with operator inputs in a secure database, and maintain continuity of knowledge on measured cylinders until inspector arrival. This report summarizes the status of the research and development of an enrichment assay methodology supporting the cylinder verification concept. The enrichment assay approach exploits a hybrid of two passively-detected ionizing-radiation signatures: the traditional enrichment meter signature (186-keV photon peak area) and a non-traditional signature, manifested in the high-energy (3 to 8 MeV) gamma-ray continuum, generated by neutron emission from UF6. PNNL has designed, fabricated, and field-tested several prototype assay sensor packages in an effort to demonstrate proof-of-principle for the hybrid assay approach, quantify the expected assay precision for various categories of cylinder contents, and assess the potential for unsupervised deployment of the technology in a portal-monitor form factor. We refer to recent sensor-package prototypes as the Hybrid Enrichment Verification Array (HEVA). The report provides an overview of the assay signatures and summarizes the results of several HEVA field measurement campaigns on populations of Type 30B UF6 cylinders containing low-enriched uranium (LEU), natural uranium (NU), and depleted uranium (DU). Approaches to performance optimization of the assay technique via radiation transport modeling are briefly described, as are spectroscopic and data-analysis algorithms.
Date: June 1, 2012
Creator: Jordan, David V.; Orton, Christopher R.; Mace, Emily K.; McDonald, Benjamin S.; Kulisek, Jonathan A. & Smith, Leon E.
Partner: UNT Libraries Government Documents Department

FLP-mediated conditional loss of an essential gene to facilitate complementation assays

Description: Commonly, when it is desirable to replace an essential gene with an allelic series of mutated genes, or genes with altered expression patterns, the complementing constructs are introduced into heterozygous plants, followed by the selection of homozygous null segregants. To overcome this laborious and time-consuming step, the newly developed two-component system utilizes a site-specific recombinase to excise a wild-type copy of the gene of interest from transformed tissues. In the first component (the first vector), a wild-type version of the gene is placed between target sequences recognized by FLP recombinase from the yeast 2 μm plasmid. This construct is transformed into a plant heterozygous for a null mutation at the endogenous locus, and progeny plants carrying the excisable complementing gene and segregating homozygous knockout at the endogenous locus are selected. The second component (the second vector) carries the experimental gene along with the FLP gene. When this construct is introduced, FLP recombinase excises the complementing gene, leaving the experimental gene as the only functional copy. The FLP gene is driven by an egg apparatus specific enhancer (EASE) to ensure excision of the complementing cDNA in the egg cell and zygote following floral-dip transformation. The utility of this system is being tested using various experimental derivatives of the essential sucrose-proton symporter, AtSUC2, which is required for photoassimilate transport.
Date: December 2007
Creator: Ganesan, Savita
Partner: UNT Libraries

Further Evaluation of the Neutron Resonance Transmission Analysis (NRTA) Technique for Assaying Plutonium in Spent Fuel

Description: This is an end-of-year report (Fiscal Year (FY) 2011) for the second year of effort on a project funded by the National Nuclear Security Administration's Office of Nuclear Safeguards (NA-241). The goal of this project is to investigate the feasibility of using Neutron Resonance Transmission Analysis (NRTA) to assay plutonium in commercial light-water-reactor spent fuel. This project is part of a larger research effort within the Next-Generation Safeguards Initiative (NGSI) to evaluate methods for assaying plutonium in spent fuel, the Plutonium Assay Challenge. The second-year goals for this project included: (1) assessing the neutron source strength needed for the NRTA technique, (2) estimating count times, (3) assessing the effect of temperature on the transmitted signal, (4) estimating plutonium content in a spent fuel assembly, (5) providing a preliminary assessment of the neutron detectors, and (6) documenting this work in an end of the year report (this report). Research teams at Los Alamos National Laboratory (LANL), Lawrence Berkeley National Laboratory (LBNL), Pacific Northwest National Laboratory (PNNL), and at several universities are also working to investigate plutonium assay methods for spent-fuel safeguards. While the NRTA technique is well proven in the scientific literature for assaying individual spent fuel pins, it is a newcomer to the current NGSI efforts studying Pu assay method techniques having just started in March 2010; several analytical techniques have been under investigation within this program for two to three years or more. This report summarizes work performed over a nine month period from January-September 2011 and is to be considered a follow-on or add-on report to our previous published summary report from December 2010 (INL/EXT-10-20620).
Date: September 1, 2011
Creator: Sterbentz, J. W. & Chichester, D. L.
Partner: UNT Libraries Government Documents Department

Transmission Nuclear Resonance Fluorescence Measurements of 238U in Thick Targets

Description: Transmission nuclear resonance fluorescence measurements were made on targets consisting of Pb and depleted U with total areal densities near 86 g/cm2. The 238U content n the targets varied from 0 to 8.5percent (atom fraction). The experiment demonstrates the capability of using transmission measurements as a non-destructive technique to identify and quantify the presence of an isotope in samples with thicknesses comparable to he average thickness of a nuclear fuel assembly. The experimental data also appear to demonstrate the process of notch refilling with a predictable intensity. Comparison of measured spectra to previous backscatter 238U measurements indicates general agreement in observed excited states. Two new 238U excited states and possibly a third state have also been observed.
Date: August 31, 2010
Creator: Quiter, Brian J.; Ludewigt, Bernhard A.; Mozin, Vladimir V.; Wilson, Cody & Korbly, Steve
Partner: UNT Libraries Government Documents Department

End-to-End Network QoS via Scheduling of Flexible Resource Reservation Requests

Description: Modern data-intensive applications move vast amounts of data between multiple locations around the world. To enable predictable and reliable data transfer, next generation networks allow such applications to reserve network resources for exclusive use. In this paper, we solve an important problem (called SMR3) to accommodate multiple and concurrent network reservation requests between a pair of end-sites. Given the varying availability of bandwidth within the network, our goal is to accommodate as many reservation requests as possible while minimizing the total time needed to complete the data transfers. We first prove that SMR3 is an NP-hard problem. Then we solve it by developing a polynomial-time heuristic, called RRA. The RRA algorithm hinges on an efficient mechanism to accommodate large number of requests by minimizing the bandwidth wastage. Finally, via numerical results, we show that RRA constructs schedules that accommodate significantly larger number of requests compared to other, seemingly efficient, heuristics.
Date: November 14, 2011
Creator: Sharma, S.; Katramatos, D. & Yu, D.
Partner: UNT Libraries Government Documents Department

Use of labeled primers for differential display

Description: The differential display of eukaryotic cDNAs using PCR allows for determination of mRNA species differentially expressed when comparing two similar cell populations. This procedure uses a (T){sub 12}XY oligonucleotide as the 3 ft primer and an arbitrary 8-10-mer as the 5 ft primer. Labeling occurs by inclusion of {alpha}[{sup 33}P]-dATP in the PCR reaction. Two artifacts caused by this approach are (1) random printing from dT present from affinity purification of PolyA+RNA and (2) hybridization of the arbitrary primer to template target sequences on both cDNA strands. In this work, we have developed an approach for both eliminating smearing and identifying nonspecific bands on sequencing gels. By separately using 5 ft-end-labeled (T){sub 12}XY and arbitrary primers to label bands and comparing two differential display patterns rather than including labeled nucleotides in the PCR reaction itself, we can detect only those products incorporating the M{sub 12}XY primer on the 3 ft ends and the arbitrary primer on 5 ft ends. Those bands that are generated randomly in the PCR reaction are readily detectable and can be ignored. If on the other hand, one is interested only in a diagnostic banding pattern for differential display, benefit can be derived from the simplicity of the pattern obtained when labeled (T){sub 12}XY is used.
Date: February 1, 1995
Creator: Paunesku, T. & Woloschak, G. E.
Partner: UNT Libraries Government Documents Department

Performance Demonstration Program Plan for Nondestructive Assay of Boxed Wastes for the TRU Waste Characterization Program

Description: Each testing and analytical facility performing waste characterization activities for the Waste Isolation Pilot Plant (WIPP) participates in the Performance Demonstration Program (PDP) to comply with the Transuranic Waste Acceptance Criteria for the Waste Isolation Pilot Plant (WAC) (DOE/WIPP-02-3122) and the Quality Assurance Program Document (QAPD) (CBFO-94-1012). The PDP serves as a quality control check for data generated in the characterization of waste destined for WIPP. Single-blind audit samples are prepared and distributed to each of the facilities participating in the PDP. Different PDPs evaluate the analyses of simulated headspace gases (HSGs), constituents of the Resource Conservation and Recovery Act (RCRA), and transuranic (TRU) radionuclides using nondestructive assay (NDA) techniques.
Date: October 1, 2009
Creator: None, None
Partner: UNT Libraries Government Documents Department

Performance Demonstration Program Plan for Nondestructive Assay of Drummed Wastes for the TRU Waste Characterization Program

Description: Each testing and analytical facility performing waste characterization activities for the Waste Isolation Pilot Plant (WIPP) participates in the Performance Demonstration Program (PDP) to comply with the Transuranic Waste Acceptance Criteria for the Waste Isolation Pilot Plant (WAC) (DOE/WIPP-02-3122) and the Quality Assurance Program Document (QAPD) (CBFO-94-1012). The PDP serves as a quality control check for data generated in the characterization of waste destined for WIPP. Single blind audit samples are prepared and distributed to each of the facilities participating in the PDP. The PDP evaluates analyses of simulated headspace gases, constituents of the Resource Conservation and Recovery Act (RCRA), and transuranic (TRU) radionuclides using nondestructive assay (NDA) techniques.
Date: April 1, 2009
Creator: /A, N
Partner: UNT Libraries Government Documents Department