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2.1 Pan-WCRP Monsoon Modelling Workshop Summary

Description: Ken Sperber led a discussion of the outcome of the Pan-WCRP Monsoon Modelling Workshop that was held at the University of California at Irvine from 15-17 June 2005. At the workshop presentations from key CLIVAR and GEWEX panels were presented to highlight the outstanding problems in modelling the Earth's monsoons. Additionally, presentations from invited experts were given to highlight important aspects of monsoon phenomena and processes, such as low-level jets, air-sea interaction, predictability, observational networks/studies, and model test beds etc. Since all persons attending the CLIVAR AAMP meeting were present for all, or most, of the monsoon workshop, a detailed description of the workshop presentations was not given. Rather, the discussion was focused on the recommendations of the workshop breakout groups and their relevance to CLIVAR AAMP. CLIVAR AAMP endorsed the near-term workshop recommendation of investigating the diurnal cycle using a hierarchy of models a key way forward for promoting CLIVAR/GEWEX interactions. In GCM studies CLIVAR researchers have identified the diurnal cycle as a forced ''mode'' of variability that is poorly represented in terms of amplitude and phase, especially in the case of precipitation. Typical phase errors of 6-12 hours are noted over both land and ocean in GCMs. CLIVAR views adequate simulation of the diurnal cycle as key aspect of variability in its own right, but also because of its potential rectification on to subseasonal variability (e.g., the Madden-Julian oscillation). It is hypothesized that improvement of diurnal variability may lead to an improved representation of intraseasonal variability and improved skill of monsoon forecasts on medium-range to seasonal time scales.
Date: June 28, 2005
Creator: Sperber, K R
open access

2-D Modeling of Energy-z Beam Dynamics Using the LiTrack Matlab Program

Description: Short bunches and the bunch length distribution have important consequences for both the LCLS project at SLAC and the proposed ILC project. For both these projects, it is important to simulate what bunch length distributions are expected and then to perform actual measurements. The goal of the research is to determine the sensitivity of the bunch length distribution to accelerator phase and voltage. This then indicates the level of control and stability that is needed. In this project I simulated beamlines to find the rms bunch length in three different beam lines at SLAC, which are the test beam to End Station A (ILC-ESA) for the ILC studies, Linac Coherent Light Source (LCLS) and LCLS-ESA. To simulate the beamlines, I used the LiTrack program, which does a 2-dimensional tracking of an electron bunch's longitudinal (z) and the energy spread beam (E) parameters. In order to reduce the time of processing the information, I developed a small program to loop over adjustable machine parameters. LiTrack is a Matlab script and Matlab is also used for plotting and saving and loading files. The results show that the LCLS in Linac-A is the most sensitive when looking at the ratio of change in phase degree to rate of change. The results also show a noticeable difference between the LCLS and LCLS-ESA, which suggest that further testing should go into looking the Beam Switch Yard and End Station A to determine why the result of the LCLS and LCLS-ESA vary.
Date: December 15, 2005
Creator: Cauley, S .K. & Woods, M.
open access

2-D or not 2-D, that is the question: A Northern California test

Description: Reliable estimates of the seismic source spectrum are necessary for accurate magnitude, yield, and energy estimation. In particular, how seismic radiated energy scales with increasing earthquake size has been the focus of recent debate within the community and has direct implications on earthquake source physics studies as well as hazard mitigation. The 1-D coda methodology of Mayeda et al. has provided the lowest variance estimate of the source spectrum when compared against traditional approaches that use direct S-waves, thus making it ideal for networks that have sparse station distribution. The 1-D coda methodology has been mostly confined to regions of approximately uniform complexity. For larger, more geophysically complicated regions, 2-D path corrections may be required. The complicated tectonics of the northern California region coupled with high quality broadband seismic data provides for an ideal ''apples-to-apples'' test of 1-D and 2-D path assumptions on direct waves and their coda. Using the same station and event distribution, we compared 1-D and 2-D path corrections and observed the following results: (1) 1-D coda results reduced the amplitude variance relative to direct S-waves by roughly a factor of 8 (800%); (2) Applying a 2-D correction to the coda resulted in up to 40% variance reduction from the 1-D coda results; (3) 2-D direct S-wave results, though better than 1-D direct waves, were significantly worse than the 1-D coda. We found that coda-based moment-rate source spectra derived from the 2-D approach were essentially identical to those from the 1-D approach for frequencies less than {approx}0.7-Hz, however for the high frequencies (0.7{le} f {le} 8.0-Hz), the 2-D approach resulted in inter-station scatter that was generally 10-30% smaller. For complex regions where data are plentiful, a 2-D approach can significantly improve upon the simple 1-D assumption. In regions where only 1-D coda correction is available it is …
Date: June 6, 2005
Creator: Mayeda, K; Malagnini, L; Phillips, W S; Walter, W R & Dreger, D
open access

2-D Path Corrections for Local and Regional Coda Waves: A Test of Transportability

Description: Reliable estimates of the seismic source spectrum are necessary for accurate magnitude, yield, and energy estimation. In particular, how seismic radiated energy scales with increasing earthquake size has been the focus of recent debate within the community and has direct implications on earthquake source physics studies as well as hazard mitigation. The 1-D coda methodology of Mayeda et al. [2003] has provided the lowest variance estimate of the source spectrum when compared against traditional approaches that use direct S-waves, thus making it ideal for networks that have sparse station distribution. The 1-D coda methodology has been mostly confined to regions of approximately uniform complexity. For larger, more geophysically complicated regions, 2-D path corrections may be required. We will compare performance of 1-D versus 2-D path corrections in a variety of regions. First, the complicated tectonics of the northern California region coupled with high quality broadband seismic data provides for an ideal ''apples-to-apples'' test of 1-D and 2-D path assumptions on direct waves and their coda. Next, we will compare results for the Italian Alps using high frequency data from the University of Genoa. For Northern California, we used the same station and event distribution and compared 1-D and 2-D path corrections and observed the following results: (1) 1-D coda results reduced the amplitude variance relative to direct S-waves by roughly a factor of 8 (800%); (2) Applying a 2-D correction to the coda resulted in up to 40% variance reduction from the 1-D coda results; (3) 2-D direct S-wave results, though better than 1-D direct waves, were significantly worse than the 1-D coda. We found that coda-based moment-rate source spectra derived from the 2-D approach were essentially identical to those from the 1-D approach for frequencies less than {approx}0.7-Hz, however for the high frequencies (0.7 {le} f {le} 8.0-Hz), the …
Date: July 13, 2005
Creator: Mayeda, K M; Malagnini, L; Phillips, W S; Walter, W R; Dreger, D S & Morasca, P
open access

2-D Reflectometer Modeling for Optimizing the ITER Low-field Side Reflectometer System

Description: The response of a low-field side reflectometer system for ITER is simulated with a 2?D reflectometer code using a realistic plasma equilibrium. It is found that the reflected beam will often miss its launch point by as much as 40 cm and that a vertical array of receiving antennas is essential in order to observe a reflection on the low-field side of ITER.
Date: September 2, 2005
Creator: Kramer, G. J.; Nazikian, R.; Valeo, E. J.; Budny, R. V.; Kessel, C. & Johnson, D.
open access

2-Page Summary for Neptunium solubility in the Near-field Environment of A Proposed Yucca Mountain Repository

Description: The total system performance assessment (TSPA) for the proposed repository at Yucca Mountain, NV, includes a wide variety of processes to evaluate the potential release of radionuclides from the Engineered Barrier System into the unsaturated zone of the geosphere. The principal processes controlling radionuclide release and mobilization from the waste forms are captured in the model to assess the dissolved concentrations of radionuclides in the source-term. The TSPA model of the source-term incorporates the far-from-equilibrium dissolution of, for example, spent nuclear fuel (SNF) to capture bounding rates of radionuclide availability as the SNF degrades. In addition, for individual radionuclides, the source-term model evaluates solubility constraints that are more indicative of longer-term, equilibrium processes that can limit the potential mass transport from the source term in those cases. These solubility limits represent phase saturation and precipitation processes that can occur either at the waste form as it alters, or at other locations in the near-field environment (e.g., within the invert) if chemical conditions are different. Identification and selection of applicable constraints for solubility-limited radionuclide concentrations is a primary focus in formulating the source-term model for the TSPA. Neptunium is a long-lived radionuclide that becomes a larger fraction of the potential dose as radioactive decay of other radionuclides proceeds. To delineate appropriate long-term source-term controls on dissolved neptunium concentrations, a number of alternative models have been defined. The models are based on data both collected within the Yucca Mountain Project and taken from published literature, and have been evaluated against independent data sets to assess their applicability. The alternative models encompass ones based on precipitation of neptunium within its own separate oxide phases (i.e., ''pure'' Np-phases), and those where neptunium is incorporated into the secondary (tertiary, quaternary, etc.) uranyl phases forming as alteration products of SNF (secondary phases). The constraints on dissolved …
Date: March 29, 2005
Creator: Sassani, D.; van Luik, A. & Summerson, J.
open access

2 Questions pertaining to DON-0133 and the non-BRAC Scenario (Portsmouth Naval Shipyard)

Description: 2 Questions pertaining to DON-0133 and the non-BRAC Senario (Portsmouth Naval Shipyard. Department of Defense Clearinghouse Response: DoD Clearinghouse reply to a letter from the BRAC Commission regarding 2 Questions pertaining to DON-0133 and the non-BRAC scenario (Portsmouth Naval Shipyard)
Date: August 12, 2005
Creator: United States. Department of Defense.
open access

A 3-D Model of Signaling and Transport Pathways in Epithelial Cells

Description: A 3-dimensional computer model was developed to simulate the spatial and chemical evolution of calcium ions inside an array of human epithelial kidney cells. This is a prototype model, intended to develop a methodology to incorporate much more complex interactions of metabolic and other processes within many types of cells and lead to increased ability to predict cellular responses to disease as well as to chemical and biological warfare situations. Preliminary tests of the model are described.
Date: April 1, 2005
Creator: Quong, Andrew A. & Westbrook, Charles K.
open access

3-D Seismic Experimentation and Advanced Processing/Inversion Development for Investigations of the Shallow Subsurface

Description: Gian Fradelizio, a Rice Ph.D. student has completed reprocessing the 3D seismic reflection data acquired at Hill AFB through post-stack depth migration for comparison to the traveltime and waveform tomography results. Zelt, Levander, Fradelizio, and 5 others spent a week at Hill AFB in September 2005, acquiring an elastic wave data set along 2 profiles. We used 60 3-component Galperin mounted 40 Hz geophones recorded by 3 GEOMETRICS Stratavision systems. The seismic source employed was a sledgehammer used to generate transverse, and radial, and vertical point source data. Data processing has begun at Rice to generate S-wave reflection and refraction images. We also acquired surface wave and ground penetrating rada data to complement the elastic wave dataset.
Date: June 1, 2005
Creator: Levander, Alan R.
open access

3-D Simulations of Plasma Wakefield Acceleration with Non-Idealized Plasmas and Beams

Description: 3-D Particle-in-cell OSIRIS simulations of the current E-162 Plasma Wakefield Accelerator Experiment are presented in which a number of non-ideal conditions are modeled simultaneously. These include tilts on the beam in both planes, asymmetric beam emittance, beam energy spread and plasma inhomogeneities both longitudinally and transverse to the beam axis. The relative importance of the non-ideal conditions is discussed and a worst case estimate of the effect of these on energy gain is obtained. The simulation output is then propagated through the downstream optics, drift spaces and apertures leading to the experimental diagnostics to provide insight into the differences between actual beam conditions and what is measured. The work represents a milestone in the level of detail of simulation comparisons to plasma experiments.
Date: September 27, 2005
Creator: Deng, S.; Katsouleas, T.; Lee, S.; Muggli, P.; Mori, W. B.; Hemker, R. et al.
open access

3-Nitropropionic Acid is a Suicide Inhibitor of MitochondrialRespiration that, Upon Oxidation by Complex II, Forms a Covalent AdductWith a Catalytic Base Arginine in the Active Site of the Enzyme

Description: We report three new structures of mitochondrial respiratory Complex II (succinate ubiquinone oxidoreductase, E.C. 1.3.5.1) at up to 2.1 {angstrom} resolution, with various inhibitors. The structures define the conformation of the bound inhibitors and suggest the residues involved in substrate binding and catalysis at the dicarboxylate site. In particular they support the role of Arg297 as a general base catalyst accepting a proton in the dehydrogenation of succinate. The dicarboxylate ligand in oxaloacetate-containing crystals appears to be the same as that reported for Shewanella flavocytochrome c treated with fumarate. The plant and fungal toxin 3-nitropropionic acid, an irreversible inactivator of succinate dehydrogenase, forms a covalent adduct with the side chain of Arg297. The modification eliminates a trypsin cleavage site in the flavoprotein, and tandem mass spectroscopic analysis of the new fragment shows the mass of Arg 297 to be increased by 83 Da and to have potential of losing 44 Da, consistent with decarboxylation, during fragmentation.
Date: December 1, 2005
Creator: Huang, Li-shar; Sun, Gang; Cobessi, David; Wang, Andy C.; Shen,John T.; Tung, Eric Y. et al.
open access

4-D High-Resolution Seismic Reflection Monitoring of Miscible CO2 Injected into a Carbonate Reservoir

Description: The objective of this research project is to acquire, process, and interpret multiple high-resolution 3-D compressional wave and 2-D, 2-C shear wave seismic data to observe changes in fluid characteristics in an oil field before, during, and after the miscible carbon dioxide (CO{sub 2}) flood that began around December 1, 2003, as part of the DOE-sponsored Class Revisit Project (DOE DE-AC26-00BC15124). Unique and key to this imaging activity is the high-resolution nature of the seismic data, minimal deployment design, and the temporal sampling throughout the flood. The 900-m-deep test reservoir is located in central Kansas oomoldic limestones of the Lansing-Kansas City Group, deposited on a shallow marine shelf in Pennsylvanian time. After 18 months of seismic monitoring, one baseline and six monitor surveys clearly imaged changes that appear consistent with movement of CO{sub 2} as modeled with fluid simulators.
Date: September 1, 2005
Creator: Miller, Richard D.; Raef, Abdelmoneam E.; Byrnes, Alan P. & Harrison, William E.
open access

An 8-Element Fast-Neutron Double-Scatter Directional Detector.

Description: We have constructed a fast-neutron double-scatter spectrometer that efficiently measures the neutron spectrum and direction of a spontaneous fission source. The device consists of two planes of organic scintillators, each having an area of 125 cm{sup 2}, efficiently coupled to photomultipliers. The four scintillators in the front plane are 2 cm thick, giving almost 25% probability of detecting an incident fission-spectrum neutron at 2 MeV by proton recoil and subsequent ionization. The back plane contains four 5-cm-thick scintillators which give a 40% probability of detecting a scattered fast neutron. A recordable double-scatter event occurs when a neutron is detected in both a front plane detector and a back plane detector within an interval of 500 nanoseconds. Each double-scatter event is analyzed to determine the energy deposited in the front plane, the time of flight between detectors, and the energy deposited in the back plane. The scattering angle of each incident neutron is calculated from the ratio of the energy deposited in the first detector to the kinetic energy of the scattered neutron.
Date: July 31, 2005
Creator: Vanier, P. E. & Forman, L.
open access

8 GeV H- ions: Transport and injection

Description: Fermilab is working on the design of an 8 GeV superconducting RF H{sup -} linac called the Proton Driver. The energy of H{sup -} beam will be an order of magnitude higher than the existing ones. This brings up a number of technical challenges to transport and injection of H{sup -} ions. This paper will focus on the subjects of stripping losses (including stripping by blackbody radiation, field and residual gas) and carbon foil stripping efficiency, along with a brief discussion on other issues such as Stark states lifetime of hydrogen atoms, single and multiple Coulomb scattering, foil heating and stress, radiation activation, collimation and jitter correction, etc.
Date: May 1, 2005
Creator: Chou, W.; Bryant, H.; Drozhdin, A.; Hill, C.; Kostin, M.; Macek, R. et al.
open access

9/11 Commission Recommendations: The Senate Confirmation Process for Presidential Nominees

Description: On July 22, 2004, the National Commission on Terrorist Attacks Upon the United States, known as the 9/11 Commission, issued its final report, detailing the events up to and including the September 11, 2001 terrorist attacks upon the United States. The 9/11 Commission recommended that the Senate adopt rules requiring hearings and votes to confirm or reject national security nominees within 30 days of their submission at the start of each new presidential administration. Implementing the commission's proposal would involve imposing new restrictions on both the power of committee chairs to control the agenda of their committees and the rights of Senators to delay or block nominations through holds and extended debate. This report discusses in detail this proposal, how it could be implemented, and the potential effects of its implementation.
Date: March 23, 2005
Creator: Palmer, Betsy
open access

10 MMBt/Hr AFBC Commercial Demonstration Cedar Lane Farms

Description: The objective of this project was to demonstrate and promote the commercialization of coal-fired atmospheric fluidized bed combustion (AFBC) systems, with limestone addition for SO2 emissions control and a baghouse for particulate emissions control. This AFBC system was targeted for small scale industrial-commercial-institutional space and process heat applications in the 4-40 MMBtu/hr size range. A cost effective and environmentally acceptable AFBC technology in this size range could displace a considerable amount of heating gas and oil with coal, while resulting in significant total cost savings to the owner/operators.
Date: October 31, 2005
Creator: Keener, Harold M.; Wicks, Mary H.; Machamer, Tom; Hoecke, Dave; Bonk, Don & Brown, Bob
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