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open access

Beyond Structural Genomics for Plant Science

Description: This book chapter provides an overview of the genomics and postgenomic technologies that are likely to have the greatest impacts on agronomy over the next 10-20 years and describes a number of case studies of their application.
Date: September 14, 2007
Creator: Dixon, R. A.; Bouton, Joseph H. (Joseph Henry), 1948-; Narasimhamoorthy, Brindha; Saha, Malay; Wang, Z.-Y. (Zeng-Yu), 1963- & May, Gregory D.
open access

Computational inference of the structure and regulation of the lignin pathway in Panicum virgatum

Description: This article uses a systems biological modeling approach to address the challenge of in vivo measurements to elucidate the structure and regulation of the lignin pathway through a computational characterization of alternate candidate topologies.
Date: September 17, 2015
Creator: Faraji, Mojdeh; Fonseca, Luis L.; Escamilla-Treviño, Luis; Dixon, R. A. & Voit, Eberhard O.
open access

Elevated CO2 increases energetic cost and ion movement in the marine fish intestine

Description: Article describes study which aimed to gain resolution in assessing the energetic demand associated with acid-base regulation by examining ion movement and O2 consumption rates of isolated intestinal tissue from Gulf toadfish acclimated to control or 1900 μatm CO2 (projected for year 2300).
Date: September 29, 2016
Creator: Heuer, Rachael M. & Grosell, Martin
open access

Enabling Large Scale Scientific Computations for Expressed Sequence Tag Sequencing over Grid and Cloud Computing Clusters

Description: This paper discusses expressed sequence tag sequencing over grid and cloud computing clusters, specifically for biological applications. In this paper, the authors propose a Web service framework for high-level job scheduling that is developed for scientific applications.
Date: September 2009
Creator: Pallickara, Sangmi Lee; Pierce, Marlon; Dong, Qunfeng & Kong, ChinHua
open access

Field-grown transgenic switchgras (Panicum virgatum L.) with altered lignin does not affect soil chemistry, microbiology, and carbon storage potential

Description: This article describes a study to evaluate effects of two independent lines of caffeic acid O-methyltransferase (COMT) downregulated switchgrass plants on soils in terms of chemistry, microbiolgy, and carbon cycling when grown in the field.
Date: September 22, 2016
Creator: DeBruyn, Jennifer M.; Bevard, David A.; Essington, Michael E.; McKnight, Julie Y.; Schaeffer, Sean M.; Baxter, Holly L. et al.
open access

Functional analysis of members of the isoflavone and isoflavanone O-methyltransferase enzyme families from the model legume Medicago truncatula

Description: Article on a functional analysis of members of the isoflavone and isoflavanone O-methyltransferase enzyme families from the model legume Medicago truncatula.
Date: September 26, 2006
Creator: Deavours, Bettina E.; Liu, Chang-Jun; Naoumkina, Marina A.; Tang, Yuhong; Farag, Mohamed A.; Sumner, Lloyd W. et al.
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