UNT Libraries - 839 Matching Results

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open access

Purification and Characterization of Proteolytic Aspartate Transcarbamoylase (ATCase) from Burkholderia cepacia 25416 and Construction of a pyrB1 Knock-out Mutant

Description: Burkholderia cepacia is a common soil bacterium of significance in agriculture and bioremediation. B. cepacia is also an opportunistic pathogen of humans causing highly communicable pulmonary infections in cystic fibrosis and immunocompromized patients. The pyrB gene encoding ATCase was cloned and ATCase was purified by the glutathione S-transferase gene fusion system. The ATCase in B. cepacia has been previously classified as a class A enzyme by Bethell and Jones. ATCase activity gels show… more
Date: December 2004
Creator: Kim, Seongcheol
open access

Purification of Aspartate Transcarbamoylase from Moraxella (Branhamella) catarrhalis

Description: The enzyme, aspartate transcarbamoylase (ATCase) from Moraxella (Branhamella) catarrhalis, has been purified. The holoenzyme has a molecular mass of approximately 510kDa, harbors predominantly positive charges and is hydrophobic in nature. The holoenzyme possesses two subunits, a smaller one of 40 kDa and a larger one of 45 kDa. A third polypeptide has been found to contribute to the overall enzymatic activity, having an approximate mass of 55 kDa. The ATCase purification included the generati… more
Date: August 2001
Creator: Stawska, Agnieszka A.
open access

Purification of Cyanide-Degrading Nitrilase from Pseudomonas Fluorescens NCIMB 11764.

Description: Cyanide is a well known toxicant that arises in the environment from both biological and industrial sources. Bacteria have evolved novel coping mechanisms for cyanide and function as principal agents in the biosphere for cyanide recycling. Some bacteria exhibit the unusual ability of growing on cyanide as the sole nitrogen source. One such organism is Pseudomonas fluorescens NCIMB 11764 (Pf11764) which employs a novel oxidative mechanism for detoxifying and assimilating cyanide. A unique comple… more
Date: December 2010
Creator: Chou, Chia-Ni
open access

Pyrethroid Insecticide Effects on Bluegill Sunfish (Lepomis Macrochirus) and the Impacts of Bluegill Predation on Invertebrates in Microcosms

Description: Concurrent outdoor aquatic 1950 L microcosm and 0.04 ha mesocosm experiments with bluegill sunfish evaluated the ecological impact of cyfluthrin. Cyfluthrin effects were not observed on mesocosm bluegill; a slight decrease in growth was observed in the microcosm bluegill. Otolith weight to length relationships between bluegill size-classes from microcosms, local streams, and a fish hatchery revealed no differences. Our results indicated bluegill predation impacts were slight on benthic inverteb… more
Date: May 1991
Creator: Morris, Rodney Gregg

Pyrimidine Enzyme Specific Activity at Four Different Phases of Growth in Minimal and Rich Media, and Concomitant Virulence Factors Evaluation in Pseudomonas aeruginosa

Description: Pseudomonas aeruginosa is a Gram-negative rod, aerobic, non-fermenting, oxidase positive, pigment producing, and nutritionally versatile bacterium. Infections by P. aeruginosa are the most important cause of morbidity and mortality in immunocompromised patients, given virulence factor production that suppresses antibiotic therapy and promotes persistent infection. This research is the first comprehensive report of the pyrimidine biosynthetic pathway for all phases of growth in minimal and ric… more
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Date: December 2005
Creator: Azad, Kamran Nikkhah
open access

Pyrimidine Genes in Pseudomonas Species

Description: This thesis is a comparative study of gene arrangements in Pseudomonas species, and is organized into three major sections. The first section compares gene arrangements for different pathways in Pseudomonas aeruginosa PAO1 to determine if the gene arrangements are similar to previous studies. It also serves as a reference for pyrimidine gene arrangements in P. aeruginosa. The second part compares the physical, and genetic maps of P. aeruginosa PAO1 with the genome sequence. The final secti… more
Date: December 2003
Creator: Roush, Wendy A.
open access

Pyrimidine Metabolism in Rhizobium: Physiological Aspects of Pyrimidine Salvage

Description: The objective of this research was to study the pyrimidine salvage pathways of Rhizobium. Three approaches were used to define the pyrimidine salvage pathways operative in two species of Rhizobium, R. meliloti and R. leguminosarum . The first approach was to ascertain the pyrimidine bases and nucleosides that could satisfy the pyrimidine requirement of pyrimidine auxotrophs. Uracil, cytosine, uridine or cytidine all satisfied the absolute pyrimidine requirement. The second approach was to selec… more
Date: December 1989
Creator: Ibrahim, Mohamed M.
open access

Pyrimidine Metabolism in Streptomyces griseus

Description: Salvage of pyrimidine nucleosides and bases by S. griseus and the regulation of aspartate transcarbamoylase (ATCase) were studied. The velocity-substrate curve for S. griseus ATCase was hyperbolic for both aspartate and carbamoylphosphate. The enzyme activity was diminished in the presence of ATP, CTP, or UTP. The synthesis of ATCase was repressed in cells grown in the presence of exogenous uracil. The specific activity of cells grown with uracil was 43 percent of that for cells grown in minima… more
Date: August 1994
Creator: Hughes, Lee E. (Lee Everette)
open access

Pyrimidine Nucleoside Metabolism in Pseudomonads and Enteric Bacteria

Description: Metabolic differences in the strategies used for pyrimidine base and nucleoside salvage were studied in the pseudomonads and enteric bacteria. Fluoro--analogs were used to select mutant strains of E. coli, S. typhimurium, P. putida, and P. aeruginosa blocked in one or more of the uracil and uridine salvage enzymes. HPLC analysis of cell-free extracts from wild-type and mutant strains examined the effectiveness of the selections. Evidence was found for cytidine kinase in Pseudomonas and for an a… more
Date: December 1991
Creator: Scott, Allelia Worrall
open access

Pyrimidine Salvage Enzymes in Microorganisms: Labyrinths of Enzymatic Diversity

Description: Pyrimidine salvage pathways are essential to all cells. They provide a balance of RNA synthesis with the biosynthetic pathway in pyrimidine prototrophs and supply all the pyrimidine requirements in auxotrophs. While the pyrimidine biosynthetic pathway is found in almost all organisms and is nearly identical throughout nature, the salvage pathway often differs from species to species, with aspects of salvage seen in every organism. Thus significant taxonomic value may be ascribed to the salvage … more
Date: December 1995
Creator: Beck, Debrah A. (Debrah Ann)
open access

Qualitative and Microcosm Predictions of Effects of Endothal for Control of Myriophyllum spicatum in Pat Mayse Lake, Texas

Description: Qualitative and microcosm models were used to predict effects of herbicide application for control of Myriophyllum spicatum. Predictions were compared to data from Pat Mayse Lake, a Texas reservoir, where localized areas were treated with endothall. Although milf oil was temporarily eliminated, when endothall was used according to manufacturer's directions, no ecologically significant direct or indirect effects were observed on nontarget species or abiotic water quality. Comparisons of the pred… more
Date: May 1984
Creator: Hinman, Mark L.
open access

Quantifying Forest Vertical Structure to Determine Bird Habitat Quality in the Greenbelt Corridor, Denton, Tx

Description: This study presents the integration of light detection and range (LiDAR) and hyperspectral remote sensing to create a three-dimensional bird habitat map in the Greenbelt Corridor of the Elm Fork of the Trinity River. This map permits to examine the relationship between forest stand structure, landscape heterogeneity, and bird community composition. A biannual bird census was conducted at this site during the breeding seasons of 2009 and 2010. Census data combined with the three-dimensional map … more
Date: August 2013
Creator: Matsubayashi, Shiho

Quantifying the Effects of Single Nucleotide Changes in the TATA Box of the Cauliflower Mosaic Virus 35S Promoter on Gene Expression in Arabidopsis thaliana

Description: Synthetic biology is a rapidly growing field that aims to treat cellular biological networks in an analogous way to electrical circuits. However, the field of plant synthetic biology has not grown at the same pace as bacterial and yeast synthetic biology, leaving a dearth of characterized tools for the community. Due to the need for tools for the synthetic plant biologist, I have endeavored to create a library of well-characterized TATA box variants in the cauliflower mosaic virus (CaMV) 35S pr… more
Date: December 2021
Creator: Amack, Stephanie Carolina
open access

Quantitation of Endogenous Nucleotide Pools in Pseudomonas aeruginosa

Description: Nucleotide pools were extracted and quantified from Pyr^+ and Pyr^- strains of P. aerucjinosa. Strains were grown in succinate minimal medium with and without pyrimidines, and nucleotides were extracted using trichloracetic acid (TCA; 6% w/v). The pyrimidine requirement was satisfied by uracil, uridine, cytosine or cytidine. Pyr^- mutants were starved for pyrimidines for two hours before nucleotide levels were measured. This starvation depleted the nucleotide pools which were restored to wild t… more
Date: August 1988
Creator: Entezampour, Mohammad
open access

Quantitative Analysis of the Gabaergic System in Cat Primary Somatosensory Cortex and Its Relation to Receptive Field Properties

Description: Sensory neocortex contains a significant number of inhibitory neurons that use gamma-aminobutyric acid (GABA) as their neurotransmitter. Functional roles for these neurons have been identified in physiological studies. For example, in primary somatosensory cortex (SI), blockade of GABAa receptors with bicuculline leads to expansion of receptive fields (RFs). The magnitude of RF enlargement varies between SIpopulations of GABAergic neurons were identified by labeling specific calcium binding pro… more
Date: May 1995
Creator: Li, Jianying
open access

Radial Compression High Performance Liquid Chromatography as a Tool for The Measurement of Endogenous Nucleotides in Bacteria

Description: High performance liquid chromatography was used to measure ribonucleoside triphosphates in microbial samples. Anion exchange columns in a radial compression module were used to separate and quantify purine and pyrimidine ribonucleotides. Endogenous ribonucleoside triphosphates were extracted from Escherichia coli and pseudomonas aeruginosa using three different solvents, namely trifluorocetic acid (TFA; 0.5M), trichloroacetic acid (TCA; 6 per cent w/v) and formic acid (1.0M) Extracts were assay… more
Date: August 1986
Creator: Dutta, Probir Kumar
open access

Rainfall-runoff changes due to urbanization: a comparison of different spatial resolutions for lumped surface water hydrology models using HEC-HMS.

Description: Hydrologic models were used to examine the effects of land cover change on the flow regime of a watershed located in North-Central Texas. Additionally, the effect of spatial resolution was examined by conducting the simulations using sub-watersheds of different sizes to account for the watershed. Using the Army Corps of Engineers, Hydrologic Engineering Center Hydrologic Modeling System (HEC-HMS), two different modeling methods were evaluated at the different sub-watershed resolutions for four … more
Date: December 2005
Creator: Redfearn, Howard Daniel
open access

Rapid Isolation and Purification of Plasmid DNA Using High Performance Liquid Chromatography

Description: High Performance Liquid Chromatography (HPLC) has been employed as an analytical tool for the purification and separation of nucleic acids. A Nucleogen DEAE 4000-10 weak anion exchange column, prepacked with modified silica gels, was used to purify and separate a number of Escherichia coli plasmids. Plasmid DNAs were extracted by the alkaline lysis method. The cleared lysate was injected directly onto the Nucleogen column, and the peaks were collected, desalted and analysed by gel electrophores… more
Date: May 1987
Creator: Nam, Kiebang
open access

Rapid Metabolic Response of Plants Exposed to Light Stress

Description: Environmental stress conditions can drastically affect plant growth and productivity. In contrast to soil moisture or salinity that can gradually change over a period of days or weeks, changes in light intensity or temperature can occur very rapidly, sometimes over the course of minutes or seconds. So, in our study we have taken an metabolomics approach to identify the rapid response of plants to light stress. In the first part we have focused on the ultrafast (0-90 sec) metabolic response of l… more
Date: May 2018
Creator: Choudhury, Feroza Kaneez
open access

Reciprocal Influences of Temperature and Copper on Fathead Minnows (Pimephales promelas)

Description: Acclimation temperature had a significant effect on the lethality of copper to fathead minnows in replicated 96-hour lethality tests. Lowest median lethal copper concentrations (LC50) were recorded at 12 and 22°C, with LC50s at 5 and 32°C at least 140 μg/1 higher. This research found LC50 copper concentrations in the 300 to 500 μg/1 range and a polynomial relationship between LC50s and acclimation temperature. Following a 24-hour exposure to three sublethal concentrations of copper, critical th… more
Date: May 1994
Creator: Richards, Virginia L. (Virginia Lynn)
open access

Recovery of the Fish Population of a Municipal Wastewater Dominated, North Texas Creek After a Major Chlorine Disturbance

Description: This study evaluated the effects of a major chlorine disturbance on fish communities in Pecan creek by the City of Denton's Pecan Creek Water Reclamation Plant. Fish communities in Pecan Creek were sampled using a depletion methodology during February, April, July, and November, 1999. February and April sampling events showed that the fish communities were severely impacted by the chlorine. Sampling during July and November showed fish communities recovered in Pecan Creek. The first-twenty minu… more
Date: August 2002
Creator: Maschmann, Gerald F.

Reduced Visceral Fat and Biological Indices of Inflammation Following Combined Prebiotic/Probiotic Supplementation in Free Living Adults

Description: Probiotics/prebiotic supplementation represents a viable option for addressing systemic inflammation and chronic disease risk resulting from excessive body weight. The purpose of this feasibility study was to determine if 90-d of supplementation with prebiotic and probiotic could alter mRNA responsible for inflammation and subsequently metabolic health in weight stable overweight adults. Participants were advised to not change their diet or exercise habits during the study. All protocols were a… more
Date: December 2021
Creator: Tanner, Elizabeth A.
open access

Regulation, Evolution, and Properties of the ato Qperon and its Gene Products in Escherichia coli

Description: The regulation of short chain fatty acid metabolism has been examined. Metabolism of acetoacetate, and short chain fatty acids such as butyrate and valerate, is predicated upon the expression of genes of the ato operon. Acetoacetate induces expression of a CoA transferase (encoded by the atoDA genes) and expression of a thiolase (encoded by the atoB gene). Metabolism of saturated short chain fatty acids requires the activities of the transferase and thiolase and enzymes of 6-oxidation as well. … more
Date: August 1993
Creator: Chen, Chaw-Yuan
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