Identification of genes in anonymous DNA sequences. Annual performance report, February 1, 1991--January 31, 1992

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The objective of this project is the development of practical software to automate the identification of genes in anonymous DNA sequences from the human, and other higher eukaryotic genomes. A software system for automated sequence analysis, gm (gene modeler) has been designed, implemented, tested, and distributed to several dozen laboratories worldwide. A significantly faster, more robust, and more flexible version of this software, gm 2.0 has now been completed, and is being tested by operational use to analyze human cosmid sequence data. A range of efforts to further understand the features of eukaryoyic gene sequences are also underway. This progress ... continued below

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97 p.

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Fields, C.A. June 1, 1996.

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Description

The objective of this project is the development of practical software to automate the identification of genes in anonymous DNA sequences from the human, and other higher eukaryotic genomes. A software system for automated sequence analysis, gm (gene modeler) has been designed, implemented, tested, and distributed to several dozen laboratories worldwide. A significantly faster, more robust, and more flexible version of this software, gm 2.0 has now been completed, and is being tested by operational use to analyze human cosmid sequence data. A range of efforts to further understand the features of eukaryoyic gene sequences are also underway. This progress report also contains papers coming out of the project including the following: gm: a Tool for Exploratory Analysis of DNA Sequence Data; The Human THE-LTR(O) and MstII Interspersed Repeats are subfamilies of a single widely distruted highly variable repeat family; Information contents and dinucleotide compostions of plant intron sequences vary with evolutionary origin; Splicing signals in Drosophila: intron size, information content, and consensus sequences; Integration of automated sequence analysis into mapping and sequencing projects; Software for the C. elegans genome project.

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97 p.

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OSTI as DE96011538

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  • Other Information: PBD: [1996]

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  • Other: DE96011538
  • Report No.: DOE/ER/60865--3
  • Grant Number: FG04-89ER60865
  • DOI: 10.2172/243485 | External Link
  • Office of Scientific & Technical Information Report Number: 243485
  • Archival Resource Key: ark:/67531/metadc673038

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  • June 1, 1996

Added to The UNT Digital Library

  • June 29, 2015, 9:42 p.m.

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  • Nov. 20, 2015, 9:11 p.m.

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Fields, C.A. Identification of genes in anonymous DNA sequences. Annual performance report, February 1, 1991--January 31, 1992, report, June 1, 1996; United States. (digital.library.unt.edu/ark:/67531/metadc673038/: accessed June 19, 2018), University of North Texas Libraries, Digital Library, digital.library.unt.edu; crediting UNT Libraries Government Documents Department.