Tracembler - software for in-silico chromosome walking in unassembled genomes

Tracembler - software for in-silico chromosome walking in unassembled genomes

Date: May 2007
Creator: Dong, Qunfeng; Wilkerson, Matthew D. & Brendel, Volker
Description: Article discussing Tracembler, a software for in-silico chromosome walking in unassembled genomes.
Contributing Partner: UNT College of Arts and Sciences
xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Date: November 20, 2006
Creator: Schlueter, Shannon D.; Wilkerson, Matthew D.; Dong, Qunfeng & Brendel, Volker
Description: Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.
Contributing Partner: UNT College of Arts and Sciences
TableMaker: An ad hoc Query Tool for Relational Databases

TableMaker: An ad hoc Query Tool for Relational Databases

Date: July 2008
Creator: Lushbough, Carol; Duvick, Jon; Dong, Qunfeng; Jennewein, Douglas; Reynoldson, Joe & Brendel, Volker
Description: This paper discusses an ad hoc query tool for relational databases. Most Web servers hosting biological data limit users to a defined set of search options and output formats that are short of the whole range of options available to users with direct database access. However, to make full use of the wealth of data in the database resource, it is desirable to have an intermediate solution that provides a broad range of flexible query and output options through a Web portal.
Contributing Partner: UNT College of Arts and Sciences
Genome-wide mutagenesis of Zea mays L. using RescueMu transposons

Genome-wide mutagenesis of Zea mays L. using RescueMu transposons

Date: 2004
Creator: Fernandes, John; Dong, Qunfeng; Schneider, Bret; Morrow, Darren J.; Nan, Guo-Ling; Brendel, Volker et al.
Description: This article discusses genome-wide mutagenesis of Zea mays L. using RescueMu transposons.
Contributing Partner: UNT College of Arts and Sciences
Comparative Plant Genomics Resources at Plant GDB

Comparative Plant Genomics Resources at Plant GDB

Date: October 2005
Creator: Dong, Qunfeng; Lawrence, Carolyn J.; Schlueter, Shannon D.; Wilkerson, Matthew D.; Kurtz, Stefan; Brendel, Volker et al.
Description: Article on comparative plant genomics resources at plant GDB.
Contributing Partner: UNT College of Arts and Sciences