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UNT College of Arts and Sciences
Catalytic Synthesis of Arylisocyanates from Nitroaromatics. A Computational Study
Date: January 10, 2007
Creator: Kazi, Abul B.; Cundari, Thomas R., 1964-; Baba, Eduard; DeYonker, Nathan J.; Dinescu, Adriana & Spaine, Lloyd
Description: This article discusses catalytic synthesis of arylisocyanates from nitroaromatics. Abstract: Several conclusions of interest have emerged from a computational study of copper-catalyzed phenylisocyanate synthesis from nitrobenzene and carbon monoxide. Nitrobenzene complexes coordinate in a κ1-N fashion. With regard to thermodynamics, differences were observed for neutral (amidate, amidinate, β-diketiminate) versus cationic (diimine, NHC) complexes, although discernible trends were less evident for calculated kinetic barriers. The deoxygenation of the nitroso oxygen of the nitrosobenzene complex to form a copper-nitrene intermediate is postulated to be the rate-determining step. For the mechanism assumed in eqs 2 through 5, each step is exothermic. These individual steps are also calculated to possess reasonable kinetic barriers. Hence, copper-based complexes deserve consideration as potential catalysts for the phosgene-free synthesis of arylisocyanates from nitroaromatics.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc77188/
Catalytic Tuning of a Phosphinoethane Ligand for Enhanced C-H Activation
Date: September 5, 2008
Creator: Cundari, Thomas R., 1964-; Jimenez-Halla, J. Oscar C.; Morello, Glenn R. & Vaddadi, Sridhar
Description: This article discusses catalytic tuning of a phosphinoethane ligand for enhanced C-H activation. Abstract: Hydrogen atom abstraction (HAA) from 1,4-cyclohexadiene (CD-H) by (dtbpe)Ni(NAr) to form a Niǀ-amide, (dtbpe)Ni(NHAr), and cyclohexadienyl radical is calculated to be thermodynamically reasonable, ∆Hʜᴀᴀ(dtbpe) = -1.3 kcal/mol, dtbpe = bis(di-tert-butylphosphino)ethane, Ar = 2,6-diisopropylphenyl. However, radical rebound to form a metal-bound amine is highly endothermic (∆Hreb(dtbpe) = +25.1 kcal/mol). Analysis of bond enthalpies indicates that weakening of the Ni-N bond (Ni-amide→Ni-amine) upon radical rebound is not compensated by the weak C-N bond formed. Hence, a ligand was sought that would enhance the metal-amine bond strength while diminishing the metal-amide bond strength. Reaction of (dfmpe)Ni(NAr) with CD-H was thus analyzed, dfmpe = bis(di(trivluoromethyl)phosphino)ethane. While there is a small change in the thermodynamics of HAA (∆Hʜᴀᴀ(dfmpe) = -5.7 kcal/mol), there is a profound change in the rebound step (∆Hreb(dfmpe) = -7.8 kcal/mol) upon replacing dtbpe by dfmpe. Regeneration of the nitrene active species by reaction of ArN3 with the metal-bound product is calculated to be highly exothermic, ∆Hreg = -36.7 kcal/mol. Two candidates for a precatalyst, (dfmpe)Ni(COD) and (dfmpe)Ni(bpy), COD = 1,5-cyclooctadiene and bpy = 2,2´-bipyridine, were calculated to undergo highly exothermic reactions with ArN3 to form the nitrene ...
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc77145/
Cation-specific and anion-specific Abraham model correlations for solute transfer into ionic liquid solvents
Date: August 2010
Creator: Grubbs, Laura M.; Saifullah, Mariam; De la Rosa, Nohelli E.; Acree, William E. (William Eugene); Abraham, Michael H.; Zhao, Qichao et al
Description: This article discusses cation-specific and anion-specific Abraham model correlations for solute transfer into ionic liquid solvents. Abstract: Data have been assembled from the published literature on the infinite dilution activity coefficients and gas solubilities of solutes dissolved in ionic liquid (IL) solvents. In total data for more than 1790 solute-IL pairs were compiled. The published experimental data were converted to gas-to-IL and water-to-IL partition coefficients, and correlated with the ion-specific equation coefficient version of the Abraham general solvation model. Ion-specific equation coefficients describe the experimental gas-to-IL and water-to-IL partition coefficient data to within 0.114 and 0.139 log units, respectively. Reported for the first time are equation coefficients for diethylphosphate, tris(pentafluoroethyl)trifluorophosphate and tetracyanoborate anions.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc152450/
Changing lenses to assess biodiversity: patterns of species richness in sub-Antarctic plants and implications for global conservation
Date: 2008
Creator: Rozzi, Ricardo, 1960-; Armesto, Juan J., 1953-; Goffinet, Bernard; Buck, William R., 1950-; Massardo, Francisca; Silander, John August, 1945- et al
Description: This article discusses changing lenses to assess biodiversity. Abstract: Taxonomic groups and ecoregions shape the "lenses" through which biodiversity is assessed and conserved. A historical bias toward vertebrates and vascular plants in the northern hemisphere underpins how global patterns of biodiversity in terrestrial ecosystems are perceived. Here, the authors focus on the hitherto overlooked non-vascular flora (liverworts and mosses) in the remote sub-Antarctic Magellanic ecoregion of southwestern South America. The authors report that: (1) this ecoregion hosts outstanding non-vascular floristic richness, with > 5% of the world's bryophytes on < 0.01% of the Earth's land surface; (2) species richness patterns for vascular and non-vascular plants are inverted across 25 degrees of latitude in Chile; and (3) while vascular plants are 20 times more abundant than non-vascular plants globally and in tropical South America, non-vascular plants are dominant in the sub-Antarctic Magellanic ecoregion and Antarctic Peninsula. These findings have been translated into policy and conservation decisions, including the creation of the Cape Horn Biosphere Reserve in 2005 and the introduction there of "tourism with a hand lens" in the diverse "miniature forests" of bryophytes, lichens, and invertebrates. The authors argue for consideration of ecoregional- or biome -specific indicator groups, rather than ...
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc130194/
Chaos and thermal conductivity
Date: December 1995
Creator: Corezzi, Silvia; Bianucci, Marco & Grigolini, Paolo
Description: This article discusses chaos and thermal conductivity. Abstract: We argue that the condition of local thermal equilibrium realized several years ago by Rich and Visscher [Phys. Rev. B 11, 2164 (1975)] through a process of mathematical convergence can be obtained dynamically by adopting the prescription of a recent paper [M. Bianucci, R. Mannella, B.J. West, and P. Grigolini, Phys. Rev. E 51, 3002 (1995)]. This should contribute to shedding light on the still unsolved problem fo the microscopic derivation of the heat Fourier law.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc139502/
Characteristic Male Urine Microbiomes Associate with Asymptomatic Sexually Transmitted Infection
Date: November 2010
Creator: Nelson, David E.; Van Der Pol, Barbara; Dong, Qunfeng; Revanna, Kashi V.; Fan, Baochang; Easwaran, Shraddha et al
Description: This article discusses characteristic male urine microbiomes. Abstract: Background: The microbiome of the male urogenital tract is poorly described but it has been suggested that bacterial colonization of the male urethra might impact risk of sexually transmitted infection (STI). Previous cultivation-dependent studies showed that a variety of non-pathogenic bacteria colonize the urethra but did not thoroughly characterize these microbiomes or establish links between the compositions of urethral microbiomes and STI. Methodology/Findings: Here, the authors used 165 rRNA PCR and sequencing to identify bacteria in urine specimens collected from men who lacked symptoms of urethral inflammation but who differed in status for STI. All of the urine samples contained multiple bacteria genera and many contained taxa that colonize the human vagina. Uncultivated bacteria associated with female genital tract pathology were abundant in specimens from men who had STI. Conclusions: Urine microbiomes from men with STI were dominated by fastidious, anaerobic and uncultivated bacteria. The same taxa were rare in STI negative individuals. The authors' findings suggest that the composition of male urine microbiomes is related to STI.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc78333/
Characterization of sub-nuclear changes in Caenorhabditis elegans embryos exposed to brief, intermediate and long-term anoxia to analyze anoxia-induced cell cycle arrest
Date: December 20, 2005
Creator: Hajeri, Vinita A.; Trejo, Jesus & Padilla, Pamela
Description: This article discusses the characterization of sub-nuclear changes in Caenorhabditis elegans embryos exposed to brief, intermediate and long-term anoxia to analyze anoxia-induced cell cycle arrest. Abstract: Background: The soil nematode C. elegans survives oxygen-deprived conditions (anoxia; <.001 kPa O₂) by entering into a state of suspended animation in which cell cycle progression reversibly arrests. The majority of blastomeres of embryos exposed to anoxia arrest at interphase, prophase and metaphase. The spindle checkpoint proteins SAN-1 and MDF-2 are required for embryos to survive 24 hours of anoxia. To further investigate the mechanism of cell-cycle arrest, the authors examined and compared sub-nuclear changes such as chromatin localization pattern, post-translational modification of histone H3, spindle microtubules, and localization of the spindle checkpoint protein SAN-1 with respect to various anoxia exposure time points. To ensure analysis of embryos exposed to anoxia and not post-anoxic recovery the authors fixed all embryos in an anoxia glove box chamber. Results: Embryos exposed to brief periods to anoxia (30 minutes) contain prophase blastomeres with chromosomes in close proximity to the nuclear membrane, condensation of interphase chromatin and metaphase blastomeres with reduced spindle microtubules density. Embryos exposed to longer periods of anoxia (1-3 days) display several characteristics including interphase ...
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc122142/
Characterization of the sorption of gaseous and organic solutes onto polydimethyl siloxane solid-phase microextraction surfaces using the Abraham model
Date: December 21, 2007
Creator: Sprunger, Laura M.; Proctor, Amy; Acree, William E. (William Eugene) & Abraham, M. H. (Michael H.)
Description: This article discusses the characterization of the sorption of gaseous and organic solutes onto polydimethyl siloxane solid-phase microextraction surfaces using the Abraham model. Abstract: Water-to-polydimethylsiloxane (PDMS) and gas-to-PDMS sorption coefficients have been compiled for 170 gaseous and organic solutes. Both sets of sorption coefficients were analyzed using the Abraham solvation parameter model. Correlations were obtained for both "dry" headspace solid-phase microextraction and conventional "wet" PDMS coated surfaces. The derived equations correlated the experimental water-to-PDMS and gas-to-PDMS data to better than 0.17 and 0.18 log units, respectively. In the case of the gas-to-PDMS sorption coefficients, the experimental values spanned a range of approximately 11 log units.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc155627/
Charge-state dependence of K-shell x-ray production in aluminum by 2-12-MeV carbon ions
Date: June 1996
Creator: Sun, H. L.; Yu, Y. C.; Lin, E. K.; Wang, C. W.; Duggan, Jerome L.; Azordegan, A. R. et al
Description: This article discusses charge-state dependence of K-shell x-ray production in aluminum by 2-12-MeV carbon ions. Abstract: Charge-state dependence for K-shell x-ray production cross sections in 13Al bombarded by 2-12-MeV 6C ions with charge states from 2+ to 6+ was measured using a Si(Li) detector. A thin Al target was used to ensure single collision conditions. Contributions of the electron capture as well as direct ionization to the inner-shell ionization were determined by an analysis of the charge-state dependence of the target x-ray production. The measurements are compared with the prediction of the ECPSSR theory using a single-hole fluorescence yield. The ECPSSR theory is based on the perturbed stationary state (PSS) formalism and relativistic efforts (R) for the target electrons, and energy loss (E) and Coulomb deflection (C) of the projectile. In general, this theory gives reasonable agreement with the data for carbon ions without K vacancies while it overpredicts the data for carbon ions with K vacancies. The significant underprediction of the data at the lowest energy is likely associated with the molecular-orbital effect that is not accounted for in the ECPSSR theory.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc139497/
Charge-state dependence of M-shell x-ray production in 67Ho by 2-12-MeV carbon ions
Date: November 1995
Creator: Yu, Y. C.; Sun, H. L.; Duggan, Jerome L.; McDaniel, Floyd Del. (Floyd Delbert), 1942-; Yin, J. Y. & Lapicki, G.
Description: This article discusses charge-state dependence of M-shell x-ray production in 67Ho by 2-12-MeV carbon ions. Abstract: Charge-state dependence of M-shell x-ray production cross sections of 67Ho bombarded by 2-12-MeV carbon ions, with and without K-shell vacancies, were measured using a windowless Si(Li) x-ray detector with a full-width-at-half-maximum resolution of 135 eV at 5.9 keV. Carbon ions of different charge states were produced using a postacceleration, nitrogen gas stripping cell. The carbon ions were then magnetically analyzed to select the desired charge state and energy before entering the target chamber. The total M-shell and Mζ, Mα,β, and Mγ x-ray cross sections were measured. The electron-capture (EC) contributions as well as the direct-ionization (DI) contributions can be determined by making a comprehensive study of the projectile-charge-state dependence of the target x-ray production cross sections for targets in which the single-collision realm is maintained. In this paper, both EC and DI contributions and the total M-shell x-ray production cross sections are compared to both the first Born theory and to the perturbed-stationary-state theory with energy-loss, Coulomb-deflection, and relativistic corrections.
Contributing Partner: UNT College of Arts and Sciences
Permallink:digital.library.unt.edu/ark:/67531/metadc139496/