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  Partner: UNT College of Arts and Sciences
 Department: Biological Sciences
Ultra-fast alterations in mRNA levels uncover multiple players in light stress acclimation in plants

Ultra-fast alterations in mRNA levels uncover multiple players in light stress acclimation in plants

Date: September 26, 2015
Creator: Suzuki, Nobuhiro; Devireddy, Amith R.; Inupakutika, Madhuri A.; Baxter, Aaron; Miller, Gad; Song, Luhua et al.
Description: This article contains RNA sequencing analysis of Arabidopsis thaliana plants subjected to light stress in order to identify and characterize rapid changes in the steady-state level of different transcripts in response to light stress.
Contributing Partner: UNT College of Arts and Sciences
Glucose or Altered Ceramide Biosynthesis Mediate Oxygen Deprivation Sensitivity Through Novel Pathways Revealed by Transcriptome Analysis in Caenorhabditis elegans

Glucose or Altered Ceramide Biosynthesis Mediate Oxygen Deprivation Sensitivity Through Novel Pathways Revealed by Transcriptome Analysis in Caenorhabditis elegans

Date: August 5, 2016
Creator: Ladage, Mary L.; King, Skylar D.; Burks, David J.; Quan, Daniel L.; Garcia, Anastacia M.; Azad, Rajeev K. et al.
Description: This article discusses how RNA-sequencing analysis was performed to assess how a glucose-supplemented diet and/or a hyl-2 mutation altered the transcriptome.
Contributing Partner: UNT College of Arts and Sciences
Viperatoxin-II: A novel viper venom protein as an effective bactericidal agent

Viperatoxin-II: A novel viper venom protein as an effective bactericidal agent

Date: October 14, 2015
Creator: Samy, Ramar Perumal; Stiles, Bradley G.; Chinnathambi, Arunachalam; Zayed, M.E.; Ali Alharbi, Sulaiman; Franco, Octávio Luiz et al.
Description: This article discusses purification and characterization of proteins from Indian Russell's viper snake venom.
Contributing Partner: UNT College of Arts and Sciences
Flocculation-Related Gene Identification by Whole-Genome Sequencing of Thauera aminoaromatica MZ1T Floc-Defective Mutants

Flocculation-Related Gene Identification by Whole-Genome Sequencing of Thauera aminoaromatica MZ1T Floc-Defective Mutants

Date: December 28, 2015
Creator: Prombutara, P. & Allen, Michael S.
Description: This article discusses the identification of genes responsible for bacterial flocculation using a whole-genome phenotypic-sequencing technique.
Contributing Partner: UNT College of Arts and Sciences
The Multifaceted Role of Curcumin in Cancer Prevention and Treatment

The Multifaceted Role of Curcumin in Cancer Prevention and Treatment

Date: February 5, 2015
Creator: Shanmugam, Muthu K.; Rane, Grishma; Mathi Kanchi, Madhu; Arfuso, Frank; Chinnathambi, Arunachalam; Zayed, M.E. et al.
Description: This review focuses on the diverse molecular targets modulated by curcumin that contribute to its efficacy against various human cancers.
Contributing Partner: UNT College of Arts and Sciences
Identification and Network-Enabled Characterization of Auxin Response Factor Genes in Medicago truncatula

Identification and Network-Enabled Characterization of Auxin Response Factor Genes in Medicago truncatula

Date: December 9, 2016
Creator: Burks, David J. & Azad, Rajeev K.
Description: This article discusses a comprehensive analysis of the Medicago truncatula genome and transcriptome that entailed search for novel Auxin Response Factor genes and the co-expression networks.
Contributing Partner: UNT College of Arts and Sciences
Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish?

Is Exposure to Macondo Oil Reflected in the Otolith Chemistry of Marsh-Resident Fish?

Date: September 28, 2016
Creator: López-Duarte, Paola C.; Fodrle, F. Joel; Jensen, Olaf P.; Whitehead, Andrew; Galvez, Fernando; Dubansky, Benjamin et al.
Description: This article evaluates otolith microchemistry as a method for assessing oil exposure history.
Contributing Partner: UNT College of Arts and Sciences
Epigenetics as a source of variation in comparative animal physiology - or - Lamarck is lookin' pretty good these days

Epigenetics as a source of variation in comparative animal physiology - or - Lamarck is lookin' pretty good these days

Date: February 26, 2014
Creator: Burggren, Warren W.
Description: This article discusses the ecological and and evolutionary significance of such epigenetic inheritance in a comparative physiological context, and provides a number of caveats and warnings regarding the interpretation of transgenerational phenotype modification as a true epigenetic phenomenon.
Contributing Partner: UNT College of Arts and Sciences
Dynamics of epigenetic phenomena: intergenerational and intragenerational phenotype 'washout'

Dynamics of epigenetic phenomena: intergenerational and intragenerational phenotype 'washout'

Date: January 7, 2015
Creator: Burggren, Warren W.
Description: This review contains a discussion of epigenetic dynamics in comparative biology with a focus on a more organismal level perspective, befitting of comparative physiology, that considers complex phenotypic changes.
Contributing Partner: UNT College of Arts and Sciences
Interspecific Differences in Metabolic Rate and Metabolic Temperature Sensitivity Create Distinct Thermal Ecological Niches in Lizards (Plestiodon)

Interspecific Differences in Metabolic Rate and Metabolic Temperature Sensitivity Create Distinct Thermal Ecological Niches in Lizards (Plestiodon)

Date: October 19, 2016
Creator: Watson, Charles M. & Burggren, Warren W.
Description: This article examines three congeneric lizards from the southeastern United States (Plestiodon fasciatus, P. inexpectatus, and P. laticeps) and hypothesizes that interspecific differences in metabolic temperature sensitivity locally segregates them across their total range.
Contributing Partner: UNT College of Arts and Sciences
Parental hypoxic exposure confers offspring hypoxia resistance in zebrafish (Danio rerio)

Parental hypoxic exposure confers offspring hypoxia resistance in zebrafish (Danio rerio)

Date: August 13, 2012
Creator: Ho, Dao H. & Burggren, Warren W.
Description: This article examines how chronic hypoxic exposure on adult zebrafish (Danio rerio) affects the phenotype of their offspring.
Contributing Partner: UNT College of Arts and Sciences
Interplay between Bladder Microbiota and Urinary Antimicrobial Peptides: Mechanisms for Human Urinary Tract Infection Risk and Symptom Severity

Interplay between Bladder Microbiota and Urinary Antimicrobial Peptides: Mechanisms for Human Urinary Tract Infection Risk and Symptom Severity

Date: December 8, 2014
Creator: Nienhouse, Vanessa; Gao, Xiang; Dong, Qunfeng; Nelson, David E.; Toh, Evelyn; McKinley, Kathleen et al.
Description: This article explores the interrelationship between the urinary microbiota and host antimicrobial peptides as mechanisms for urinary tract infection risk.
Contributing Partner: UNT College of Arts and Sciences
Epigenetics and transgenerational transfer: a physiological perspective

Epigenetics and transgenerational transfer: a physiological perspective

Date: December 12, 2009
Creator: Ho, Dao H. & Burggren, Warren W.
Description: This review discusses how the concepts of epigenetics and maternal effects both overlap with, and are distinct from each other, analyzes examples of existing animal physiological studies based on these concepts, and offers a construct by which to integrate these concepts into the design of future investigations in animal physiology.
Contributing Partner: UNT College of Arts and Sciences
Egg yolk environment differentially influences physiological and morphological development of broiler and layer chicken embryos

Egg yolk environment differentially influences physiological and morphological development of broiler and layer chicken embryos

Date: January 26, 2011
Creator: Ho, Dao H.; Reed, Wendy L. & Burggren, Warren W.
Description: This article investigates the effect of breed-specific yolk composition on embryonic broiler and layer chicken phenotypes, using an ex ovo, xenobiotic technique that allows the transfer of broiler and layer chicken embryos from their natural yolks to novel yolk environments.
Contributing Partner: UNT College of Arts and Sciences
Leukocyte Subset Changes in Response to a 164-km Road Cycle Ride in a Hot Environment

Leukocyte Subset Changes in Response to a 164-km Road Cycle Ride in a Hot Environment

Date: January 15, 2016
Creator: Luk, Hui-Ying; McKenzie, Amy L.; Duplanty, Anthony A.; Budnar, Ronald; Levitt, Danielle; Fernandez, Alex et al.
Description: This article determines the circulating leukocyte subset response to completing the 2013 Hotter'N Hell Hundred recreational 164-km road cycle event in a hot and humid environmental condition.
Contributing Partner: UNT College of Arts and Sciences
Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium)

Parallel expression evolution of oxidative stress-related genes in fiber from wild and domesticated diploid and polyploid cotton (Gossypium)

Date: August 17, 2009
Creator: Chaudhary, Bhupendra; Hovav, Ran; Flagel, Lex; Mittler, Ron & Wendel, Jonathan F.
Description: This article studies the evolution of oxidative stress related genes in a single plant cell by conducting comparative expression profiling analyses of the elongated seed trichomes of cotton, using a phylogenetic approach.
Contributing Partner: UNT College of Arts and Sciences
What makes species unique? The contribution of proteins with obscure features

What makes species unique? The contribution of proteins with obscure features

Date: June 27, 2006
Creator: Gollery, Martin; Harper, Jeffrey F.; Cushman, John; Mittler, Taliah; Girke, Thomas; Zhu, Jian-Kang et al.
Description: This article performs a comparative analysis of the predicted proteomes derived from 10 different sequenced genomes, including budding and fission yeast, worm, fly, mosquito, Arabidopsis, rice, mouse, rat, and human.
Contributing Partner: UNT College of Arts and Sciences
Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick)

Modelling spatial concordance between Rocky Mountain spotted fever disease incidence and habitat probability of its vector Dermacentor variabilis (American dog tick)

Date: November 1, 2012
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Description: This article reports on the development and comparison of two maps of Texas related to Rocky Mountain spotted fever.
Contributing Partner: UNT College of Arts and Sciences
Prioritizing Riparian Cooridors for Water Quality Protection in Urbanizing Watersheds

Prioritizing Riparian Cooridors for Water Quality Protection in Urbanizing Watersheds

Date: May 21, 2010
Creator: Atkinson, Samuel F.; Hunter, Bruce & English, April
Description: This article describes the design of a GIS and remote sensing based analysis tool called the Water Quality Corridor Management model to identify and prioritize highly functioning riparian ecosystems for the preservation of steam corridor conditions.
Contributing Partner: UNT College of Arts and Sciences
A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick)

A determination of the spatial concordance between Lyme disease incidence and habitat probability of its primary vector Ixodes scapularis (black-legged tick)

Date: November 1, 2014
Creator: Atkinson, Samuel F.; Sarkar, Sahotra; Avina, Aldo; Schuermann, Jim A. & Williamson, Phillip C.
Description: This article involves mapping the probability of occurrence that the disease vector exists in the environment, mapping the incidence of Lyme disease in the human population and examining the spatial concordance between the probability map and incidence map.
Contributing Partner: UNT College of Arts and Sciences
Cardiovascular function, compliance, and connective tissue remodeling in the turtle, Trachemys scripta, following thermal acclimation

Cardiovascular function, compliance, and connective tissue remodeling in the turtle, Trachemys scripta, following thermal acclimation

Date: April 13, 2016
Creator: Keen, Adam N.; Shiels, Holly A. & Crossley II, Dane A.
Description: This article suggests that cold acclimation alters cardiac shunting patterns with an increased R-L shunt flow, achieved through reducing systemic resistance and increasing systemic blood flow.
Contributing Partner: UNT College of Arts and Sciences
3,5-Bis(4-chlorobenzylidene)-1-methyl-piperidin-4-one

3,5-Bis(4-chlorobenzylidene)-1-methyl-piperidin-4-one

Date: February 23, 2011
Creator: Nesterov, Volodymyr V.; Sarkisov, Sergey S.; Shulaev, Vladimir & Nesterov, Vladimir N.
Description: In the title molecule, C₂₀H₁₇Cl₂NO, the central heterocyclic ring adopts a flattened boat conformation.
Contributing Partner: UNT College of Arts and Sciences
1-Benzyl-3,5-bis(4-chlorobenzylidene)-piperidin-4-one

1-Benzyl-3,5-bis(4-chlorobenzylidene)-piperidin-4-one

Date: May 16, 2011
Creator: Nesterov, Volodymyr V.; Sarkisov, Sergey S.; Shulaev, Vladimir & Nesterov, Vladimir N.
Description: The title compound, C₂₆H₂₁Cl₂NO, crystallizes with two symmetry-independent molecules in the asymmetric unit.
Contributing Partner: UNT College of Arts and Sciences
Genome Sequences of Streptomyces Phages Amela and Verse

Genome Sequences of Streptomyces Phages Amela and Verse

Date: February 18, 2016
Creator: Layton, Sonya R.; Hemenway, Ryan M.; Munyoki, Christine M.; Barnes, Emory B.; Barnett, Sierra E.; Bond, Alec M. et al.
Description: This article describes Amela and Verse, two Streptomyces phages isolated by enrichment on Streptomyces venezuelae (ATCC 10712) from two different soil samples.
Contributing Partner: UNT College of Arts and Sciences
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