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20002009
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 Anderson Localization in TwoChannel Wires with Correlated Disorder: DNA as an Application
 This research studied the Anderson localization of electrons in twochannel wires with correlated disorder and in DNA molecules. It involved an analytical calculation part where the formula for the inverse localization length for electron states in a twochannel wire is derived. It also involved a computational part where the localization length is calculated for some DNA molecules. Electron localization in twochannel wires with correlated disorder was studied using a singleelectron tightbinding model. Calculations were within secondorder Bornapproximation to secondorder in disorder parameters. An analytical expression for localization length as a functional of correlations in potentials was found. Anderson localization in DNA molecules were studied in singlechannel wire and twochannel models for electron transport in DNA. In both of the models, some DNA sequences exhibited delocalized electron states in their energy spectrum. Studies with twochannel wire model for DNA yielded important link between electron localization properties and genetic information. digital.library.unt.edu/ark:/67531/metadc5204/
 Application of the Finite Element Method to Some Simple Systems in One and Two Dimensions.
 The finite element method (FEM) is reviewed and applied to the onedimensional eigensystems of the isotropic harmonic oscillator, finite well, infinite well and radial hydrogen atom, and the twodimensional eigensystems of the isotropic harmonic oscillator and the propagational modes of sound in a rectangular cavity. Computer codes that I developed were introduced and utilized to find accurate results for the FEM eigensolutions. One of the computer codes was modified and applied to the onedimensional unbound quantum mechanical system of a square barrier potential and also provided accurate results. digital.library.unt.edu/ark:/67531/metadc3087/
 Approach to Quantum Information starting from Bell's Inequality (Part I) and Statistical Analysis of Time Series Corresponding to Complex Processes (Part II)

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I: Quantum information obeys laws that subtly extend those governing classical information, making possible novel effect such as cryptography and quantum computation. Quantum computations are extremely sensitive to disruption by interaction of the computer with its environment, but this problem can be overcome by recently developed quantum versions of classical errorcorrecting codes and faulttolerant circuits. Based on these ideas, the purpose of this paper is to provide an approach to quantum information by analyzing and demonstrating Bell's inequality and by discussing the problems related to decoherence and errorcorrecting. II: The growing need for a better understanding of complex processes has stimulated the development of new and more advanced data analysis techniques. The purpose of this research was to investigate some of the already existing techniques (Hurst's rescaled range and relative dispersion analysis), to develop a software able to process time series with these techniques, and to get familiar with the theory of diffusion processes. digital.library.unt.edu/ark:/67531/metadc3092/  Ballistic Deposition: Global Scaling and Local Time Series.
 Complexity can emerge from extremely simple rules. A paradigmatic example of this is the model of ballistic deposition (BD), a simple model of sedimentary rock growth. In two separate ProbleminLieuof Thesis studies, BD was investigated numerically in (1+1)D on a lattice. Both studies are combined in this document. For problem I, the global interface roughening (IR) process was studied in terms of effective scaling exponents for a generalized BD model. The model used incorporates a tunable parameter B to change the cooperation between aggregating particles. Scaling was found to depart increasingly from the predictions of KardarParisiZhang theory both with decreasing system sizes and with increasing cooperation. For problem II, the local single column evolution during BD rock growth was studied via statistical analysis of time series. Connections were found between single column time series properties and the global IR process. digital.library.unt.edu/ark:/67531/metadc4392/
 Brownian Movement and Quantum Computers

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This problem in lieu of thesis is a discussion of two topics: Brownian movement and quantum computers. Brownian movement is a physical phenomenon in which the particle velocity is constantly undergoing random fluctuations. Chapters 2, 3 and 4, describe Brownian motion from three different perspectives. The next four chapters are devoted to the subject of quantum computers, which are the signal of a new era of technology and science combined together. In the first chapter I present to a reader the two topics of my problem in lieu of thesis. In the second chapter I explain the idea of Brownian motion, its interpretation as a stochastic process and I find its distribution function. The next chapter illustrates the probabilistic picture of Brownian motion, where the statistical averages over trajectories are related to the probability distribution function. Chapter 4 shows how to derive the Langevin equation, introduced in chapter 1, using a Hamiltonian picture of a bath with infinite number of harmonic oscillators. The chapter 5 explains how the idea of quantum computers was developed and how stepbystep all the puzzles for the field of quantum computers were created. The next chapter, chapter 6, discus the basic quantum unit of information namely, the so called qubit and its properties. Chapter 7 is devoted to quantum logic gates, which are important for conducting logic operation in quantum computers. This chapter explains how they were developed and how they are different from classical ones. Chapter 8 is about the quantum algorithm, Shor's algorithm. Quantum algorithm in quantum computers enables one to solve problems that are hard to solve on digital computers. The last chapter contains conclusions on Brownian movement and the field of quantum computers. digital.library.unt.edu/ark:/67531/metadc4660/  Carbon Nanotube/Microwave Interactions and Applications to Hydrogen Fuel Cells.

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One of the leading problems that will be carried into the 21st century is that of alternative fuels to get our planet away from the consumption of fossil fuels. There has been a growing interest in the use of nanotechnology to somehow aid in this progression. There are several unanswered questions in how to do this. It is known that carbon nanotubes will store hydrogen but it is unclear how to increase that storage capacity and how to remove this hydrogen fuel once stored. This document offers some answers to these questions. It is possible to implant more hydrogen in a nanotube sample using a technique of ion implantation at energy levels ~50keV and below. This, accompanied with the rapid removal of that stored hydrogen through the application of a microwave field, proves to be one promising avenue to solve these two unanswered questions. digital.library.unt.edu/ark:/67531/metadc5796/  Chaos and Momentum Diffusion of the Classical and Quantum Kicked Rotor
 The de BroglieBohm (BB) approach to quantum mechanics gives trajectories similar to classical trajectories except that they are also determined by a quantum potential. The quantum potential is a "fictitious potential" in the sense that it is part of the quantum kinetic energy. We use quantum trajectories to treat quantum chaos in a manner similar to classical chaos. For the kicked rotor, which is a bounded system, we use the Benettin et al. method to calculate both classical and quantum Lyapunov exponents as a function of control parameter K and find chaos in both cases. Within the chaotic sea we find in both cases nonchaotic stability regions for K equal to multiples of π. For even multiples of π the stability regions are associated with classical accelerator mode islands and for odd multiples of π they are associated with new oscillator modes. We examine the structure of these regions. Momentum diffusion of the quantum kicked rotor is studied with both BB and standard quantum mechanics (SQM). A general analytical expression is given for the momentum diffusion at quantum resonance of both BB and SQM. We obtain agreement between the two approaches in numerical experiments. For the case of nonresonance the quantum potential is not zero and must be included as part of the quantum kinetic energy for agreement. The numerical data for momentum diffusion of classical kicked rotor is well fit by a power law DNβ in the number of kicks N. In the anomalous momentum diffusion regions due to accelerator modes the exponent β(K) is slightly less than quadratic, except for a slight dip, in agreement with an upper bound (K2/2)N2. The corresponding coefficient D(K) in these regions has three distinct sections, most likely due to accelerator modes with period greater than one. We also show that the local Lyapunov exponent of the classical kicked rotor has a plateau for a duration that depends on the initial separation and then decreases asymptotically as O(t1lnt), where t is the time. This behavior is consistent with an upper bound that is determined analytically. digital.library.unt.edu/ark:/67531/metadc4824/
 Characterization, Properties and Applications of Novel Nanostructured Hydrogels.

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The characterization, properties and applications of the novel nanostructured microgel (nanoparticle network and microgel crystal) composed of polyNisopropylacrylanmidecoallylamine (PNIPAMcoallylamine) and PNIPAMcoacrylic acid(AA) have been investigated. For the novel nanostructured hydrogels with the two levels of structure: the primary network inside each individual particle and the secondary network of the crosslinked nanoparticles, the new shear modulus, drug release law from hydrogel with heterogeneous structure have been studied. The successful method for calculating the volume fraction related the phase transition of colloid have been obtained. The kinetics of crystallization in an aqueous dispersion of PNIPAM particles has been explored using UVvisible transmission spectroscopy. This dissertation also includes the initial research on the melting behavior of colloidal crystals composed of PNIPAM microgels. Many new findings in this study area have never been reported before. The theoretical model for the columnar crystal growth from the top to bottom of PNIPAM microgel has been built, which explains the growth mechanism of the novel columnar hydrogel colloidal crystals. Since the unique structure of the novel nanostructured hydrogels, their properties are different with the conventional hydrogels and the hardspherelike system. The studies and results in this dissertation have the important significant for theoretical study and valuable application of these novel nanostructured hydrogels. digital.library.unt.edu/ark:/67531/metadc5605/  Charge Collection Studies on Integrated Circuit Test Structures using HeavyIon Microbeams and MEDICI Simulation Calculations
 Ion induced charge collection dynamics within Integrated Circuits (ICs) is important due to the presence of ionizing radiation in the IC environment. As the charge signals defining data states are reduced by voltage and area scaling, the semiconductor device will naturally have a higher susceptibility to ionizing radiation induced effects. The ionizing radiation can lead to the undesired generation and migration of charge within an IC. This can alter, for example, the memory state of a bit, and thereby produce what is called a "soft" error, or Single Event Upset (SEU). Therefore, the response of ICs to natural radiation is of great concern for the reliability of future devices. Immunity to soft errors is listed as a requirement in the 1997 National Technology Roadmap for Semiconductors prepared by the Semiconductor Industry Association in the United States. To design more robust devices, it is essential to create and test accurate models of induced charge collection and transport in semiconductor devices. A heavy ion microbeam produced by an accelerator is an ideal tool to study charge collection processes in ICs and to locate the weak nodes and structures for improvement through hardening design. In this dissertation, the Ion Beam Induced Charge Collection (IBICC) technique is utilized to simulate recoil effects of ions in ICs. These silicon or light ion recoils are usually produced by the elastic scattering or inelastic reactions between cosmic neutrons or protons and the lattice atoms in ICs. Specially designed test structures were experimentally studied, using microbeams produced at Sandia National Laboratories. A new technique, Diffusion Time Resolved IBICC, is first proposed in this work to measure the average arrival time of the diffused charge, which can be related to the first moment (or the average time) of the arrival carrier density at the junction. A 2D device simulation tool, the MEDICI code, and heavyion microbeams are used to calculate and measure charge collection and relative arrival time on stripelike test junctions. The MEDICI simulation is in qualitative and sometimes even quantitative agreement with the microbeam measurements. The amount of charge collection and the magnitude of average arrival time for diffused charge collection can be crucial to understanding and mitigating radiation induced circuit malfunctions during normal IC operations. digital.library.unt.edu/ark:/67531/metadc2469/
 Complexity as a Form of Transition From Dynamics to Thermodynamics: Application to Sociological and Biological Processes.
 This dissertation addresses the delicate problem of establishing the statistical mechanical foundation of complex processes. These processes are characterized by a delicate balance of randomness and order, and a correct paradigm for them seems to be the concept of sporadic randomness. First of all, we have studied if it is possible to establish a foundation of these processes on the basis of a generalized version of thermodynamics, of nonextensive nature. A detailed account of this attempt is reported in Ignaccolo and Grigolini (2001), which shows that this approach leads to inconsistencies. It is shown that there is no need to generalize the KolmogorovSinai entropy by means of a nonextensive indicator, and that the anomaly of these processes does not rest on their nonextensive nature, but rather in the fact that the process of transition from dynamics to thermodynamics, this being still extensive, occurs in an exceptionally extended time scale. Even, when the invariant distribution exists, the time necessary to reach the thermodynamic scaling regime is infinite. In the case where no invariant distribution exists, the complex system lives forever in a condition intermediate between dynamics and thermodynamics. This discovery has made it possible to create a new method of analysis of nonstationary time series which is currently applied to problems of sociological and physiological interest. digital.library.unt.edu/ark:/67531/metadc4209/
 Complexity as Aging NonPoisson Renewal Processes
 The search for a satisfactory model for complexity, meant as an intermediate condition between total order and total disorder, is still subject of debate in the scientific community. In this dissertation the emergence of nonPoisson renewal processes in several complex systems is investigated. After reviewing the basics of renewal theory, another popular approach to complexity, called modulation, is introduced. I show how these two different approaches, given a suitable choice of the parameter involved, can generate the same macroscopic outcome, namely an inverse power law distribution density of events occurrence. To solve this ambiguity, a numerical instrument, based on the theoretical analysis of the aging properties of renewal systems, is introduced. The application of this method, called renewal aging experiment, allows us to distinguish if a time series has been generated by a renewal or a modulation process. This method of analysis is then applied to several physical systems, from blinking quantum dots, to the human brain activity, to seismic fluctuations. Theoretical conclusions about the underlying nature of the considered complex systems are drawn. digital.library.unt.edu/ark:/67531/metadc3706/
 The Concept of Collision Strength and Its Applications
 Collision strength, the measure of strength for a binary collision, hasn't been defined clearly. In practice, many physical arguments have been employed for the purpose and taken for granted. A scattering angle has been widely and intensively used as a measure of collision strength in plasma physics for years. The result of this is complication and unnecessary approximation in deriving some of the basic kinetic equations and in calculating some of the basic physical terms. The Boltzmann equation has a fivefold integral collision term that is complicated. Chandrasekhar and Spitzer's approaches to the linear FokkerPlanck coefficients have several approximations. An effective variablechange technique has been developed in this dissertation as an alternative to scattering angle as the measure of collision strength. By introducing the square of the reduced impulse or its equivalencies as a collision strength variable, many plasma calculations have been simplified. The fivefold linear Boltzmann collision integral and linearized Boltzmann collision integral are simplified to threefold integrals. The arbitrary order linear FokkerPlanck coefficients are calculated and expressed in a uniform expression. The new theory provides a simple and exact method for describing the equilibrium plasma collision rate, and a precise calculation of the equilibrium relaxation time. It generalizes bimolecular collision reaction rate theory to a reaction rate theory for plasmas. A simple formula of high precision with wide temperature range has been developed for electron impact ionization rates for carbon atoms and ions. The universality of the concept of collision strength is emphasized. This dissertation will show how Arrhenius' chemical reaction rate theory and Thomson's ionization theory can be unified as one single theory under the concept of collision strength, and how many important physical terms in different disciplines, such as activation energy in chemical reaction theory, ionization energy in Thomson's ionization theory, and the Coulomb logarithm in plasma physics, can be unified into a single one  the threshold value of collision strength. The collision strength, which is a measure of a transfer of momentum in units of energy, can be used to reconcile the differences between Descartes' opinion and Leibnitz's opinion about the "true'' measure of a force. Like Newton's second law, which provides an instantaneous measure of a force, collision strength, as a cumulative measure of a force, can be regarded as part of a law of force in general. digital.library.unt.edu/ark:/67531/metadc4530/
 Decoherence, Master Equation for Open Quantum Systems, and the Subordination Theory
 This thesis addresses the problem of a form of anomalous decoherence that sheds light into the spectroscopy of blinking quantum dots. The system studied is a twostate system, interacting with an external environment that has the effect of establishing an interaction between the two states, via a coherence generating coupling, called inphasing. The collisions with the environment produce also decoherence, named dephasing. Decoherence is interpreted as the entanglement of the coherent superposition of these two states with the environment. The joint action of inphasing and dephasing generates a Markov master equation statistically equivalent to a random walker jumping from one state to the other. This model can be used to describe intermittent fluorescence, as a sequence of "light on" and "light off" states. The experiments on blinking quantum dots indicate that the sojourn times are distributed with an inverse power law. Thus, a proposal to turn the model for Poisson fluorescence intermittency into a model for nonPoisson fluorescence intermittency is made. The collisionlike interaction of the twostate system with the environment is assumed to takes place at random times rather than at regular times. The time distance between one collision and the next is given by a distribution, called the subordination distribution. If the subordination distribution is exponential, a sequence of collisions yielding no persistence is turned into a sequence of "light on" and "light off" states with significant persistence. If the subordination function is an inverse power law the sequel of "light on" and "light off" states becomes equivalent to the experimental sequences. Different conditions are considered, ranging from predominant inphasing to predominant dephasing. When dephasing is predominant the sequel of "light on" and "light off" states in the time asymptotic limit becomes an inverse power law. If the predominant dephasing involves a time scale much larger than the minimum time scale accessible to the experimental observation, thereby generating persistence, the resulting distribution becomes a MittagLeffler function. If dephasing is predominant, in addition to the inverse power law distribution of "light off" and "light on" time duration, a strong correlation between "light on" and "light off" state is predicted. digital.library.unt.edu/ark:/67531/metadc4812/
 A Dynamic and Thermodynamic Approach to Complexity.
 The problem of establishing the correct approach to complexity is a very hot and crucial issue to which this dissertation gives some contributions. This dissertation considers two main possibilities, one, advocated by Tsallis and coworkers, setting the foundation of complexity on a generalized, nonextensive , form of thermodynamics, and another, proposed by the UNT Center for Nonlinear Science, on complexity as a new condition that, for physical systems, would be equivalent to a state of matter intermediate between dynamics and thermodynamics. In the first part of this dissertation, the concept of KolmogorovSinai entropy is introduced. The Pesin theorem is generalized in the formalism of Tsallis nonextensive thermodynamics. This generalized form of Pesin theorem is used in the study of two major classes of problems, whose prototypes are given by the Manneville and the logistic map respectively. The results of these studies convince us that the approach to complexity must be made along lines different from those of the nonextensive thermodynamics. We have been convinced that the Lévy walk can be used as a prototype model of complexity, as a condition of balance between order and randomness that yields new phenomena such as aging, and multifractality. We reach the conclusions that these properties must be studied within a dynamic rather than thermodynamic perspective. The second part focuses on the study of the heart beating problem using a dynamic model, the socalled memory beyond memory, based on the Lévy walker model. It is proved that the memory beyond memory effect is more obvious in the healthy heart beating sequence. The concepts of fractal, multifractal, wavelet transformation and wavelet transform maximum modulus (WTMM) method are introduced. Artificial time sequences are generated by the memory beyond memory model to mimic the heart beating sequence. Using WTMM method, the multifratal singular spectrums of the sequences are calculated. It is clear that the sequence with strong memory beyond memory effect has broader singular spectrum.200308 digital.library.unt.edu/ark:/67531/metadc4276/
 The Dynamic Foundation of Fractal Operators.
 The fractal operators discussed in this dissertation are introduced in the form originally proposed in an earlier book of the candidate, which proves to be very convenient for physicists, due to its heuristic and intuitive nature. This dissertation proves that these fractal operators are the most convenient tools to address a number of problems in condensed matter, in accordance with the point of view of many other authors, and with the earlier book of the candidate. The microscopic foundation of the fractal calculus on the basis of either classical or quantum mechanics is still unknown, and the second part of this dissertation aims at this important task. This dissertation proves that the adoption of a master equation approach, and so of probabilistic as well as dynamical argument yields a satisfactory solution of the problem, as shown in a work by the candidate already published. At the same time, this dissertation shows that the foundation of Levy statistics is compatible with ordinary statistical mechanics and thermodynamics. The problem of the connection with the KolmogorovSinai entropy is a delicate problem that, however, can be successfully solved. The derivation from a microscopic Liouvillelike approach based on densities, however, is shown to be impossible. This dissertation, in fact, establishes the existence of a striking conflict between densities and trajectories. The third part of this dissertation is devoted to establishing the consequences of the conflict between trajectories and densities in quantum mechanics, and triggers a search for the experimental assessment of spontaneous wavefunction collapses. The research work of this dissertation has been the object of several papers and two books. digital.library.unt.edu/ark:/67531/metadc4235/
 The Effect of Average Grain Size on Polycrystalline Diamond Films
 The work function of hydrogenterminated, polycrystalline diamond was studied using ultraviolet photoelectron spectroscopy. Polycrystalline diamond films were deposited onto molybdenum substrates by electrophoresis for grain sizes ranging from 0.3 to 108 microns. The work function and electron affinity were measured using 21.2 eV photons from a helium plasma source. The films were characterized by xray photoelectron spectroscopy to determine elemental composition and the sp2/sp3 carbon fraction. The percentage of (111) diamond was determined by xray diffraction, and scanning electron microscopy was performed to determine average grain size. The measured work function has a maximum of 5.1 eV at 0.3 microns, and decreases to 3.2 eV at approximately 4 microns. Then the work function increases with increasing grain size to 4.0 eV at 15 microns and then asymptotically approaches the 4.8 eV work function of single crystal diamond at 108 microns. These results are consistent with a 3component model in which the work function is controlled by singlecrystal (111) diamond at larger grain sizes, graphitic carbon at smaller grain sizes, and by the electron affinity for the intervening grain sizes. digital.library.unt.edu/ark:/67531/metadc3164/
 The Effects of Cesium Deposition and Gas Exposure on the Field Emission Properties of Single Wall and Multiwall Carbon Nanotubes
 The effects of Cs deposition on the field emission (FE) properties of singlewalled carbon nanotube (SWNT) bundles were studied. In addition, a comparative study was made on the effects of O2, Ar and H2 gases on the field emission properties of SWNT bundles and multiwall carbon nanotubes (MWNTs). We observed that Cs deposition decreases the turnon field for FE by a factor of 2.1  2.9 and increases the FE current by 6 orders of magnitude. After Cs deposition, the FE current versus voltage (IV) curves showed nonFowlerNordheim behavior at large currents consistent with tunneling from adsorbate states. At lower currents, the ratio of the slope of the FE IV curves before and after Cs deposition was approximately 2.1. Exposure to N2 does not decrease the FE current, while exposure to O2 decreases the FE current. Our results show that cesiated SWNT bundles have great potential as economical and reliable vacuum electron sources. We find that H2 and Ar gases do not significantly affect the FE properties of SWNTs or MWNTs. O2 temporarily reduces the FE current and increases the turnon voltage of SWNTs. Full recovery of these properties occurred after operation in UHV. The higher operating voltages in an O2 environment caused a permanent decrease of FE current and increase in turnon field of MWNTs. The ratios of the slopes before and after O2 exposure were approximately 1.04 and 0.82 for SWNTs and MWNTs, respectively. SWNTs compared to MWNTs would appear to make more economical and reliable vacuum electron sources. digital.library.unt.edu/ark:/67531/metadc3110/
 Emergence of Complexity from Synchronization and Cooperation
 The dynamical origin of complexity is an object of intense debate and, up to moment of writing this manuscript, no unified approach exists as to how it should be properly addressed. This research work adopts the perspective of complexity as characterized by the emergence of nonPoisson renewal processes. In particular I introduce two new complex system models, namely the twostate stochastic clocks and the integrateandfire stochastic neurons, and investigate its coupled dynamics in different network topologies. Based on the foundations of renewal theory, I show how complexity, as manifested by the occurrence of nonexponential distribution of events, emerges from the interaction of the units of the system. Conclusion is made on the work's applicability to explaining the dynamics of blinking nanocrystals, neuron interaction in the human brain, and synchronization processes in complex networks. digital.library.unt.edu/ark:/67531/metadc6107/
 Energy Distribution of Sputtered Neutral Atoms from a Multilayer Target
 Energy distribution measurements of sputtered neutral particles contribute to the general knowledge of sputtering, a common technique for surface analysis. In this work emphasis was placed on the measurement of energy distribution of sputtered neutral atoms from different depths. The liquid GaIn eutectic alloy as a sample target for this study was ideal due to an extreme concentration ratio gradient between the top two monolayers. In pursuing this study, the method of sputterinitiated resonance ionization spectroscopy (SIRIS) was utilized. SIRIS employs a pulsed ion beam to initiate sputtering and tunable dye lasers for resonance ionization. Observation of the energy distribution was achieved with a positionsensitive detector. The principle behind the detector's energy resolution is time of flight (TOF) spectroscopy. For this specific detector, programmed time intervals between the sputtering pulse at the target and the ionizing laser pulse provided information leading to the energy distribution of the secondary neutral particles. This experiment contributes data for energy distributions of sputtered neutral particles to the experimental database, required by theoretical models and computer simulations for the sputtering phenomenon. digital.library.unt.edu/ark:/67531/metadc2657/
 An entropic approach to the analysis of time series.
 Statistical analysis of time series. With compelling arguments we show that the Diffusion Entropy Analysis (DEA) is the only method of the literature of the Science of Complexity that correctly determines the scaling hidden within a time series reflecting a Complex Process. The time series is thought of as a source of fluctuations, and the DEA is based on the Shannon entropy of the diffusion process generated by these fluctuations. All traditional methods of scaling analysis, instead, are based on the variance of this diffusion process. The variance methods detect the real scaling only if the Gaussian assumption holds true. We call H the scaling exponent detected by the variance methods and d the real scaling exponent. If the time series is characterized by Fractional Brownian Motion, we have H¹d and the scaling can be safely determined, in this case, by using the variance methods. If, on the contrary, the time series is characterized, for example, by Lévy statistics, H ¹ d and the variance methods cannot be used to detect the true scaling. Lévy walk yields the relation d=1/(32H). In the case of Lévy flights, the variance diverges and the exponent H cannot be determined, whereas the scaling d exists and can be established by using the DEA. Therefore, only the joint use of two different scaling analysis methods, the variance scaling analysis and the DEA, can assess the real nature, Gauss or Lévy or something else, of a time series. Moreover, the DEA determines the information content, under the form of Shannon entropy, or of any other convenient entopic indicator, at each time step of the process that, given a sufficiently large number of data, is expected to become diffusion with scaling. This makes it possible to study the regime of transition from dynamics to thermodynamics, nonstationary regimes, and the saturation regime as well. First of all, the efficiency of the DEA is proved with theoretical arguments and with numerical work on artificial sequences. Then we apply the DEA to three different sets of real data, Genome sequences, hard xray solar flare waiting times and sequences of sociological interest. In all these cases the DEA makes new properties, overlooked by the standard method of analysis, emerge. digital.library.unt.edu/ark:/67531/metadc3033/
 Exploration of hierarchical leadership and connectivity in neural networks in vitro.
 Living neural networks are capable of processing information much faster than a modern computer, despite running at significantly lower clock speeds. Therefore, understanding the mechanisms neural networks utilize is an issue of substantial importance. Neuronal interaction dynamics were studied using histiotypic networks growing on microelectrode arrays in vitro. Hierarchical relationships were explored using bursting (when many neurons fire in a short time frame) dynamics, pairwise neuronal activation, and information theoretic measures. Together, these methods reveal that global network activity results from ignition by a small group of burst leader neurons, which form a primary circuit that is responsible for initiating most networkwide burst events. Phase delays between leaders and followers reveal information about the nature of the connection between the two. Physical distance from a burst leader appears to be an important factor in follower response dynamics. Information theory reveals that mutual information between neuronal pairs is also a function of physical distance. Activation relationships in developing networks were studied and plating density was found to play an important role in network connectivity development. These measures provide unique views of network connectivity and hierarchical relationship in vitro which should be included in biologically meaningful models of neural networks. digital.library.unt.edu/ark:/67531/metadc9775/
 Fractional Brownian motion and dynamic approach to complexity.
 The dynamic approach to fractional Brownian motion (FBM) establishes a link between nonPoisson renewal process with abrupt jumps resetting to zero the system's memory and correlated dynamic processes, whose individual trajectories keep a nonvanishing memory of their past time evolution. It is well known that the recrossing times of the origin by an ordinary 1D diffusion trajectory generates a distribution of time distances between two consecutive origin recrossing times with an inverse power law with index m=1.5. However, with theoretical and numerical arguments, it is proved that this is the special case of a more general condition, insofar as the recrossing times produced by the dynamic FBM generates process with m=2H. Later, the model of ballistic deposition is studied, which is as a simple way to establish cooperation among the columns of a growing surface, to show that cooperation generates memory properties and, at same time, nonPoisson renewal events. Finally, the connection between trajectory and density memory is discussed, showing that the trajectory memory does not necessarily yields density memory, and density memory might be compatible with the existence of abrupt jumps resetting to zero the system's memory. digital.library.unt.edu/ark:/67531/metadc3992/
 Growing carbon nanotubes by chemical vapor deposition technique.

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Carbon nanotubes were synthesized in the laboratory using chemical vapor deposition at different methane concentration. I found that a methane concentration of 4 sccm was ideal for well recognizable carbon nanotubes. A higher concentration led to fewer nanotube growth and silicon carbide structure. Coating the sample first with Fe(NO3)3 created a catalyst base on the substrate for the nanotube to adhere and grow on. digital.library.unt.edu/ark:/67531/metadc2454/  Growth and Characterization of βIron Disilicide, βIron Silicon Germanide, and Osmium Silicides
 The semiconducting silicides offer significant potential for use in optoelectronic devices. Full implementation of the materials, however, requires the ability to tailor the energy gap and band structure to permit the synthesis of heterojunctions. One promising approach is to alloy the silicides with Ge. As part of an investigation into the synthesis of semiconducting silicide heterostructures, a series of βFe(Si1−xGex)2 epilayer samples, with nominal alloy content in the range 0 < x < 0.15, have been prepared by molecular beam epitaxy on Si(100). I present results of the epitaxial and crystalline quality of the films, as determined by reflection highenergy electron diffraction, Rutherford backscattering spectroscopy, and double crystal xray diffraction, and of the band gap dependence on the alloy composition, as determined by Fourier transform infrared spectroscopy. A reduction in band gap was observed with increasing Ge content, in agreement with previous theoretical predictions. However Ge segregation was also observed in βFe(Si1−xGex)2 epilayers when x > 0.04. Osmium silicide films have been grown by molecular beam epitaxy on Si(100). The silicides have been grown using ebeam evaporation sources for both Os and Si onto Si(100) substrates at varying growth rates and temperatures ranging from 600700ºC. The resulting films have been analyzed using reflection highenergy electron diffraction, Raman spectroscopy, reflectivity measurements, inplane and out of plane Xray diffraction and temperature dependent magnetotransport. A change in crystalline quality is observed with an increase in Si overpressure. For a lower silicon to osmium flux ration (JSi/JOs=1.5) both OsSi2 and Os2Si3 occur, whereas with a much larger Si overpressure (JSi/JOs>4), crystalline quality is greatly increased and only a single phase, Os2Si3, is present. The outofplane Xray diffraction data show that the film grows along its [4 0 2] direction, with a good crystal quality as evidenced by the small FWHM in the rocking curve. The inplane Xray diffraction data show growth twins with perpendicular orientation to each other. digital.library.unt.edu/ark:/67531/metadc12107/
 Investigation of Selected OpticallyActive Nanosystems Fashioned using Ion Implantation
 Optoelectronic semiconductor technology continues to grow at an accelerated pace, as the industry seeks to perfect devices such as light emitting diodes for purposes of optical processing and communication. A strive for greater efficiency with shrinking device dimensions, continually pushes the technology from both a design and materials aspect. Nanosystems such a quantum dots, also face new material engineering challenges as they enter the realm of quantum mechanics, with each system and material having markedly different electronic properties. Traditionally, the semiconductor industry has focused on materials such Group IIVI and IIIV compounds as the basis material for future optoelectronic needs. Unfortunately, these material systems can be expensive and have difficulties integrating into current Sibased technology. The industry is reluctant to leave silicon due in part to silicon's high quality oxide, and the enormous amount of research invested into silicon based circuit fabrication. Although recently materials such as GaN are starting to dominate the electrooptical industry since a Sibased substitute has not been found. The purpose of the dissertation was to examine several promising systems that could be easily integrated into current Sibased technology and also be produced using simple inexpensive fabrication techniques such ion implantation. The development of optically active nanosized precipitates in silica to form the active layer of an optoelectronic device was achieved with ion implantation and thermal annealing. Three material systems were investigated. These systems consisted of carbon, silicon and metal silicide based nanocrystals. The physical morphology and electronic properties were monitored using a variety of material characterization techniques. Rutherford backscattering/channeling were used to monitor elemental concentrations, photoluminescence was used to monitor the optoelectronic properties and transmission electron microscopy was used to study the intricate morphology of individual precipitates. The electronic properties and the morphology were studied as a function of implant dose, anneal times and anneal temperatures. digital.library.unt.edu/ark:/67531/metadc5259/
 IonInduced Damage In Si: A Fundamental Study of Basic Mechanisms over a Wide Range of Implantation Conditions
 A new understanding of the damage formation mechanisms in Si is developed and investigated over an extended range of ion energy, dose, and irradiation temperature. A simple model for dealing with ioninduced damage is proposed, which is shown to be applicable over the range of implantation conditions. In particular the concept of defect "excesses" will be discussed. An excess exists in the lattice when there is a local surplus of one particular type of defect, such as an interstitial, over its complimentary defect (i.e., a vacancy). Mechanisms for producing such excesses by implantation will be discussed. The basis of this model specifies that accumulation of stable lattice damage during implantation depends upon the excess defects and not the total number of defects. The excess defect model is validated by fundamental damage studies involving ion implantation over a range of conditions. Confirmation of the model is provided by comparing damage profiles after implantation with computer simulation results. It will be shown that transport of ions in matter (TRIM) can be used effectively to model the ioninduced damage profile, i.e. excess defect distributions, by a simple subtraction process in which the spatially correlated defects are removed, thereby simulating recombination. Classic defect studies illuminate defect interactions from concomitant implantation of high and mediumenergy Si+self ions. Also, the predictive quality of the excess defect model was tested by applying the model to develop several experiments to engineer excess defect concentrations to substantially change the nature and distribution of the defects. Not only are the excess defects shown to play a dominant role in defectrelated processing issues, but their manipulation is demonstrated to be a powerful tool in tailoring the implantation process to achieve design goals. Preamorphization and dual implantation of different energetic ions are two primary investigative tools used in this work. Various analyses, including XTEM, RBS/channeling, PAS, and SIMS, provided experimental verification of the excess defect model disseminated within this dissertation. digital.library.unt.edu/ark:/67531/metadc5248/
 Magnetotransport Properties of AlxIn1xAsySb1y/GaSb and Optical Properties of GaAs1xSbx
 Multilayer structures of AlxIn1xAsySb1y/GaSb (0.37 £ x £ 0.43, 0.50 £ y £ 0.52), grown by molecular beam epitaxy on GaSb (100) substrates were characterized using variable temperature Hall and Shubnikovde Haas techniques. For nominally undoped structures both p and ntype conductivity was observed. The mobilities obtained were lower than those predicted by an interpolation method using the binary alloys; therefore, a detailed analysis of mobility versus temperature data was performed to extract the appropriate scattering mechanisms. For ptype samples, the dominant mechanism was ionized impurity scattering at low temperatures and polar optical phonon scattering at higher temperatures. For ntype samples, ionized impurity scattering was predominant at low temperatures, and electronhole scattering dominated for both the intermediate and high temperature range. Analyses of the Shubnikovde Haas data indicate the presence of 2D carrier confinement consistent with energy subbands in GaAszSb1z potential wells. Epilayers of GaAs1xSbx (0.19<x<0.71), grown by MBE on semiinsulating GaAs with various substrate orientations, were studied by absorption measurements over the temperature range of 4300 K. The various substrate orientations were chosen to induce different degrees of spontaneous atomic ordering. The temperature dependence of the energy gap (Eg) for each of these samples was modeled using three semiempirical relationships. The resulting coefficients for each model describe not only the temperature dependence of Eg for each of the alloy compositions investigated, but also for all published results for this alloy system. The effect of ordering in these samples was manifested by a deviation of the value of Eg from the value of the random alloy. The presence of CuPtB type atomic ordering was verified by transmission electron diffraction measurements, and the order parameter was estimated for all the samples investigated and found to be larger for the samples grown on the (111) A offcut orientations. This result strongly suggests that it is the A steps that contribute to the formation of the CuPtB type ordering in the GaAs1xSbx alloy system. digital.library.unt.edu/ark:/67531/metadc5522/
 Maxwell's Equations from Electrostatics and Einstein's Gravitational Field Equation from Newton's Universal Law of Gravitation Using Tensors
 Maxwell's equations are obtained from Coulomb's Law using special relativity. For the derivation, tensor analysis is used, charge is assumed to be a conserved scalar, the Lorentz force is assumed to be a pure force, and the principle of superposition is assumed to hold. Einstein's gravitational field equation is obtained from Newton's universal law of gravitation. In order to proceed, the principle of least action for gravity is shown to be equivalent to the maximization of proper time along a geodesic. The conservation of energy and momentum is assumed, which, through the use of the Bianchi identity, results in Einstein's field equation. digital.library.unt.edu/ark:/67531/metadc4532/
 Mechanism and the Effect of MicrowaveCarbon Nanotube Interaction
 A series of experimental results about unusual heating of carbon nanotubes by microwaves is analyzed in this dissertation. Two of vibration types, cantilever type (one end is fixed and the other one end is free), the second type is both ends are fixed, have been studied by other people. A third type of forced vibration of carbon nanotubes under an alternating electromagnetic field is examined in this paper. Heating of carbon nanotubes (CNTs) by microwaves is described in terms of nonlinear dynamics of a vibrating nanotube. Results from the model provide a way to understand several observations that have been made. It is shown that transverse vibrations of CNTs during microwave irradiation can be attributed to transverse parametric resonance, as occurs in the analysis of Melde's experiment on forced longitudinal vibrations of a stretched elastic string. For many kinds of carbon nanotubes (SWNT, DWNT, MWNT, ropes and strands) the resonant parameters are found to be located in an unstable region of the parameter space of Mathieu's equation. Third order wave equations are used to qualitatively describe the effects of phononphonon interactions and energy transfer from microwaves to CNTs. This result provides another way to input energy from microwaves to carbon nanotubes besides the usual Joule heating via electronphonon interaction. This model appears to be the first to point out the role of nonlinear dynamics in the heating of CNTs by microwaves. digital.library.unt.edu/ark:/67531/metadc4919/
 Microscopic Foundations of Thermodynamics and Generalized Statistical Ensembles
 This dissertation aims at addressing two important theoretical questions which are still debated in the statistical mechanical community. The first question has to do with the outstanding problem of how to reconcile timereversal asymmetric macroscopic laws with the timereversal symmetric laws of microscopic dynamics. This problem is addressed by developing a novel mechanical approach inspired by the work of Helmholtz on monocyclic systems and the Heat Theorem, i.e., the Helmholtz Theorem. By following a line of investigation initiated by Boltzmann, a Generalized Helmholtz Theorem is stated and proved. This theorem provides us with a good microscopic analogue of thermodynamic entropy. This is the volume entropy, namely the logarithm of the volume of phase space enclosed by the constant energy hypersurface. By using quantum mechanics only, it is shown that such entropy can only increase. This can be seen as a novel rigorous proof of the Second Law of Thermodynamics that sheds new light onto the arrow of time problem. The volume entropy behaves in a thermodynamiclike way independent of the number of degrees of freedom of the system, indicating that a whole thermodynamiclike world exists at the microscopic level. It is also shown that breaking of ergodicity leads to microcanonical phase transitions associated with nonanalyticities of volume entropy. The second part of the dissertation deals with the problem of the foundations of generalized ensembles in statistical mechanics. The starting point is Boltzmann's work on statistical ensembles and its relation with the Heat Theorem. We first focus on the nonextensive thermostatistics of Tsallis and the associated deformed exponential ensembles. These ensembles are analyzed in detail and proved (a) to comply with the requirements posed by the Heat Theorem, and (b) to interpolate between canonical and microcanonical ensembles. Further they are showed to describe finite systems in contact with finite heat baths. Their mechanical and informationtheoretic foundation, are highlighted. Finally, a wide class of generalized ensembles is introduced, all of which reproduce the Heat Theorem. This class, named the class of dual orthodes, contains microcanonical, canonical, Tsallis and Gaussian ensembles as special cases. digital.library.unt.edu/ark:/67531/metadc6128/
 Microstructure and Electronic Structures of ErDoped Si Nanoparticles Synthesized by Vapor Phase Pyrolysis

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Si nanoparticles are new prospective optoelectronic materials. Unlike bulk Si crystals, Si nanoparticles display intriguing roomtemperature photoluminescence. A major challenge in the fabrication of Si nanoparticles is the control of their size distribution. The rareearth element Er has unique photo emission properties, including low pumping power, and a temperature independent, sharp spectrum. The emission wavelength matches the transmission window of optical fibers used in the telecommunications industry. Therefore, the study of Erdoped Si nanoparticles may have practical significance. The goals of the research described in this dissertation are to investigate vapor phase pyrolysis methods and to characterize the microstructure and associated defects, particles size distributions and photoluminescence efficiencies of doped and undoped Si nanoparticles using analytical transmission electron microscopy, high resolution electron microscopy, and optical spectroscopy. Erdoped and undoped Si nanoparticles were synthesized via vaporphase pyrolysis of disilane at Texas Christian University. To achieve monodisperse size distributions, a process with fast nucleation and slow growth was employed. Disilane was diluted to 0.48% with helium. A horizontal pyrolysis oven was maintained at a temperature of 1000 °C. The oven length was varied from 1.5 cm to 6.0 cm to investigate the influence of oven length on the properties of the nanoparticles. The Si nanoparticles were collected in ethyleneglycol. The doped and undoped Si nanoparticles have a Si diamond cubic crystal structure. Neither Er precipitation, Er oxides or Er silicides were detected in any of the samples. The Er dopant concentration was about 2 atom% for doped samples from the 3.0 and 6.0 cm ovens as determined by quantitative analysis using Xray energy dispersive spectroscopy. The average Si nanoparticle size increases from 11.3 to 15.2 nm in the doped samples and from 11.1 to 15.7 nm in the undoped samples as the oven length increases from 1.5 to 6.0 cm. HREM data show that average Si nanocrystallite size varies from 6.4 to 3.3 to 5.9 nm in the doped samples, and from 7.5 to 12.2 nm in the undoped samples as the oven length increases. Roomtemperature Er photoluminescence has been detected near 1.54 :m from all doped samples. Saturation of the Er photoluminescence intensity at large emission power and the monotonic decrease of the intensity as a function of the emission wavelength in the doped sample from the 3.0 cm oven suggest that a carriermediated energy transfer process occurs in the Erdoped Si nanoparticles. It is the first time to successfully fabricate and investigate Erdoped Si nanoparticles. digital.library.unt.edu/ark:/67531/metadc2476/  Microwave Cavity Test for Superconductivity

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The first part of this paper describes the Meissner effect in superconductors which serves as the most definitive evidence for superconductivity. It is shown that the microwave perturbation technique may be used to demonstrate this effect. By measuring the changes of resonant frequency and inverse quality factor Q of a microwave cavity with a small volume of sample loading, the Meissner effect can be shown by using the Slater perturbation equation. The experimental system is described with details and the basic principle of each component discussed. The second part of this work describes the technique employed to do the actual measurements. The experiments were conducted on samples of Gallium Arsenide (GaAs) and lead zirconate titanate (PZT) to look for the possible high temperature superconductivity properties. Results of these experiments are presented and discussed. Conclusion and suggestions to future exploration are made. digital.library.unt.edu/ark:/67531/metadc2996/  Monte Carlo simulation and experimental studies of the production of neutronrich medical isotopes using a particle accelerator.

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The developments of nuclear medicine lead to an increasing demand for the production of radioisotopes with suitable nuclear and chemical properties. Furthermore, from the literature it is evident that the production of radioisotopes using chargedparticle accelerators instead of nuclear reactors is gaining increasing popularity. The main advantages of producing medical isotopes with accelerators are carrier free radionuclides of short lived isotopes, improved handling, reduction of the radioactive waste, and lower cost of isotope fabrication. Protonrich isotopes are the result of nuclear interactions between enriched stable isotopes and energetic protons. An interesting observation is that during the production of protonrich isotopes, fast and intermediately fast neutrons from nuclear reactions such as (p,xn) are also produced as a byproduct in the nuclear reactions. This observation suggests that it is perhaps possible to use these neutrons to activate secondary targets for the production of neutronrich isotopes. The study of secondary radioisotope production with fast neutrons from (p,xn) reactions using a particle accelerator is the main goal of the research in this thesis. digital.library.unt.edu/ark:/67531/metadc3077/  Multifunctional OrganicInorganic Hybrid Nanophotonic Devices
 The emergence of optical applications, such as lasers, fiber optics, and semiconductor based sources and detectors, has created a drive for smaller and more specialized devices. Nanophotonics is an emerging field of study that encompasses the disciplines of physics, engineering, chemistry, biology, applied sciences and biomedical technology. In particular, nanophotonics explores optical processes on a nanoscale. This dissertation presents nanophotonic applications that incorporate various forms of the organic polymer Nisopropylacrylamide (NIPA) with inorganic semiconductors. This includes the material characterization of NIPA, with such techniques as ellipsometry and dynamic light scattering. Two devices were constructed incorporating the NIPA hydrogel with semiconductors. The first device comprises a PNIPAMCdTe hybrid material. The PNIPAM is a means for the control of distances between CdTe quantum dots encapsulated within the hydrogel. Controlling the distance between the quantum dots allows for the control of resonant energy transfer between neighboring quantum dots. Whereby, providing a means for controlling the temperature dependent redshifts in photoluminescent peaks and FWHM. Further, enhancement of photoluminescent due to increased scattering in the medium is shown as a function of temperature. The second device incorporates NIPA into a 2D photonic crystal patterned on GaAs. The refractive index change of the NIPA hydrogel as it undergoes its phase change creates a controllable mechanism for adjusting the transmittance of light frequencies through a linear defect in a photonic crystal. The NIPA infiltrated photonic crystal shows greater shifts in the bandwidth per ºC than any liquid crystal methods. This dissertation demonstrates the versatile uses of hydrogel, as a means of control in nanophotonic devices, and will likely lead to development of other hybrid applications. The development of smaller light based applications will facilitate the need to augment the devices with control mechanism and will play an increasing important role in the future. digital.library.unt.edu/ark:/67531/metadc6108/
 Nested Well Plasma Traps
 Criteria for the confinement of plasmas consisting of a positive and negative component in Penning type traps with nested electric potential wells are presented. Computational techniques for the selfconsistent calculation of potential and plasma density distributions are developed. Analyses are presented of the use of nested well Penning traps for several applications. The analyses include: calculations of timescales relevant to the applications, e.g. reaction, confinement and relaxation timescales, selfconsistent computations, and consideration of other physical phenomenon important to the applications. Possible applications of a nested well penning trap include production of high charge state ions, studies of high charge state ions, and production of antihydrogen. In addition the properties of a modified Penning trap consisting of an electric potential well applied along a radial magnetic field are explored. digital.library.unt.edu/ark:/67531/metadc2647/
 Neutron Transmutation and Hydrogenation Study of Hg₁₋xCdxTe
 Anomalous Hall behavior of HgCdTe refers to a "double crossover" feature of the Hall coefficient in ptype material, or a peak in the Hall mobility or Hall coefficient in ntype material. A magnetoconductivity tensor approach was utilized to identify presence of two electrons contributing to the conduction as well as transport properties of each electron in the material. The two electron model for the mobility shows that the anomalous Hall behavior results from the competition of two electrons, one in the energy gap graded region near the CdZnTe/HgCdTe interface with large band gap and the other in the bulk of the LPE film with narrow band gap. Hg0.78Cd0.22Te samples grown by LPE on CdZnTe(111B)oriented substrates were exposed to various doses of thermal neutrons (~1.7 x 1016  1.25 x 1017 /cm2) and subsequently annealed at ~220oC for ~24h in Hg saturated vapor to recover damage and reduce the presence of Hg vacancies. Extensive Magnetotransport measurements were performed on these samples. SIMS profile for impurities produced by neutron irradiation was also obtained. The purpose for this study is to investigate the influence of neutron irradiation on this material as a basis for further study on HgCdTe74Se. The result shows that total mobility is observed to decrease with increased neutron dose and can be fitted by including a mobility inverse proportional to neutron dose. Electron introduction rate of thermal neutron is much smaller than that of fission neutrons. Total recovering of the material is suggested to have longer time annealing. Using Kane's model, we also fitted carrier concentration change at low temperature by introducing a donor level with activation energy changing with temperature. Results on Se diffusion in liquid phase epitaxy (LPE) grown HgCdTe epilayers is reported. The LPE Hg0.78Cd0.22Te samples were implanted with Se of 2.0×1014/cm2 at 100keV and annealed at 350450oC in mercury saturated vapor. Secondary ions mass spectrometry (SIMS) profiles were obtained for each sample. From a Gaussian fit we find that the Se diffusion coefficient DSe is about one to two orders of magnitude smaller than that of arsenic. The asimplanted Se distribution is taken into account in case of small diffusion length in Gaussian fitting. Assuming a Te vacancy based mechanism, the Arrhenius relationship yields an activation energy 1.84eV. Dislocations introduced in HgCdTe materials result in two energy levels, where one is a donor and one is an acceptor. Hydrogenation treatment can effectively neutralize these dislocation defect levels. Both experimental results and theoretical calculation show that the mobility due to dislocation scattering remains constant in the low temperature range (<77K), and increases with temperature between 77K and 150K. Dislocation scattering has little effect on electrical transport properties of HgCdTe with an EPD lower than 107/cm2. Dislocations may have little effect on carrier concentration for semiconductor material with zinc blende structure due to self compensation. digital.library.unt.edu/ark:/67531/metadc9126/
 NonPoissonian statistics, aging and "blinking'" quantum dots.
 This dissertation addresses the delicate problem of aging in complex systems characterized by nonPoissonian statistics. With reference to a generic twostates system interacting with a bath it is shown that to properly describe the evolution of such a system within the formalism of the continuous time random walk (CTRW), it has to be taken into account that, if the system is prepared at time t=0 and the observation of the system starts at a later time ta>0, the distribution of the first sojourn times in each of the two states depends on ta, the age of the system. It is shown that this aging property in the fractional derivative formalism forces to introduce a fractional index depending on time. It is shown also that, when a stationary condition exists, the Onsager regression principle is fulfilled only if the system is aged and consequently if an infinitely aged distribution for the first sojourn times is adopted in the CTRW formalism used to describe the system itself. This dissertation, as final result, shows how to extend to the nonPoisson case the Kubo Anderson (KA) lineshape theory, so as to turn it into a theoretical tool adequate to describe the time evolution of the absorption and emission spectra of CdSe quantum dots. The fluorescence emission of these single nanocrystals exhibits interesting intermittent behavior, namely, a sequence of "light on" and "light off" states, departing from Poisson statistics. Taking aging into account an exact analytical treatment is derived to calculate the spectrum. In the regime fitting experimental data this final result implies that the spectrum of the "blinking" quantum dots must age forever. digital.library.unt.edu/ark:/67531/metadc4555/
 The Nonadditive Generalization of Klimontovich's STheorem for Open Systems and Boltzmann's Orthodes
 We show that the nonadditive open systems can be studied in a consistent manner by using a generalized version of Stheorem. This new generalized Stheorem can further be considered as an indication of selforganization in nonadditive open systems as prescribed by Haken. The nonadditive Stheorem is then illustrated by using the modified Van der Pol oscillator. Finally, Tsallis entropy as an equilibrium entropy is studied by using Boltzmann's method of orthodes. This part of dissertation shows that Tsallis ensemble is on equal footing with the microcanonical, canonical and grand canonical ensembles. However, the associated entropy turns out to be Renyi entropy. digital.library.unt.edu/ark:/67531/metadc9124/
 Nonlinear UV Laser Buildup Cavity: An Efficient Design
 Using the concept of the buildup cavity for second harmonic generation to produce 243nm laser light, an innovative cavity is theoretically explored using a 15mm length CLBO crystal. In order to limit the losses of the cavity, the number of effective optical surfaces is kept to only four and the use of a MgF2 crystal is adopted to separate the harmonic and fundamental laser beam from each other. The cavity is shown to have an expected round trip loss of five tenths of a percent or better, resulting in a conversion efficiency greater than 65%. digital.library.unt.edu/ark:/67531/metadc9833/
 A Novel Process for GeSi Thin Film Synthesis
 A unique process of fabricating a strained layer GexSi1x on insulator is demonstrated. Such strained heterostructures are useful in the fabrication of highmobility transistors. This technique incorporates wellestablished silicon processing technology e.g., ion implantation and thermal oxidation. A dilute GeSi layer is initially formed by implanting Ge+ into a silicononinsulator (SOI) substrate. Thermal oxidation segregates the Ge at the growing oxide interface to form a distinct GexSi1x thinfilm with a composition that can be tailored by controlling the oxidation parameters (e.g. temperature and oxidation ambient). In addition, the film thickness can be controlled by implantation fluence, which is important since the film forms pseudomorphically below 2×1016 Ge/cm2. Continued oxidation consumes the underlying Si leaving the strained GeSi film encapsulated by the two oxide layers, i.e. the top thermal oxide and the buried oxide. Removal of the thermal oxide by a dilute HF etch completes the process. Strain relaxation can be achieved by either of two methods. One involves vacancy injection by ion implantation to introduce sufficient openvolume within the film to compensate for the compressive strain. The other depends upon the formation of GeO2. If Ge is oxidized in the absence of Si, it evaporates as GeO(g) resulting in spontaneous relaxation within the strained film. Conditions under which this occurs have been discussed along with elaborated results of oxidation kinetics of Geion implanted silicon. Rutherford backscattering spectrometry (RBS), ion channeling, Raman spectroscopy and scanning electron microscopy (SEM) were used as the characterization techniques. digital.library.unt.edu/ark:/67531/metadc5167/
 Oligonucleotide guanosine conjugated to gallium nitride nanostructures for photonics.
 In this work, I studied the hybrid system based on selfassembled guanosine crystal (SAGC) conjugated to widebandgap semiconductor gallium nitride (GaN). Guanosine is one of the four bases of DNA and has the lowest oxidation energy, which favors carrier transport. It also has large dipole moment. Guanosine molecules selfassemble to ribbonlike structure in confined space. GaN surface can have positive or negative polarity depending on whether the surface is Ga or Nterminated. I studied SAGC in confined space between two electrodes. The currentvoltage characteristics can be explained very well with the theory of metalsemiconductormetal (MSM) structure. IV curves also show strong rectification effect, which can be explained by the intrinsic polarization along the axis of ribbonlike structure of SAGC. GaN substrate property influences the properties of SAGC. So SAGC has semiconductor properties within the confined space up to 458nm. When the gap distance gets up to 484nm, the structure with guanosine shows resistance characteristics. The photocurrent measurements show that the bandgap of SAGC is about 3.33.4eV and affected by substrate properties. The MSM structure based on SAGC can be used as photodetector in UV region. Then I show that the periodic structure based on GaN and SAGC can have photonic bandgaps. The bandgap size and the band edges can be tuned by tuning lattice parameters. Light propagation and emission can be tuned by photonic crystals. So the hybrid photonic crystal can be potentially used to detect guanosine molecules. If guanosine molecules are used as functional linker to other biomolecules which usually absorb or emit light in blue to UV region, the hybrid photonic crystal can also be used to tune the coupling of light source to guanosine molecules, then to other biomolecules. digital.library.unt.edu/ark:/67531/metadc9065/
 Perturbation of renewal processes
 Renewal theory began development in the early 1940s, as the need for it in the industrial engineering subdiscipline operations research had risen. In time, the theory found applications in many stochastic processes. In this thesis I investigated the effect of seasonal effects on Poisson and nonPoisson renewal processes in the form of perturbations. It was determined that the statistical analysis methods developed at UNT Center for Nonlinear Science can be used to detect the effects of seasonality on the data obtained from Poisson/nonPoisson renewal systems. It is proved that a perturbed Poisson process can serve as a paradigmatic model for a case where seasonality is correlated to the noise and that diffusion entropy method can be utilized in revealing this relation. A renewal model making a connection with the stochastic resonance phenomena is used to analyze a previous neurological experiment, and it was shown that under the effect of a nonlinear perturbation, a nonPoisson system statistics may make a transition and end up in the of Poisson basin of statistics. I determine that nonlinear perturbation of the power index for a complex system will lead to a change in the complexity characteristics of the system, i.e., the system will reach a new form of complexity. digital.library.unt.edu/ark:/67531/metadc6140/
 Polymer Gels: Kinetics, Dynamics Studies and Their Applications as Biomaterials
 The polymer gels especially hydrogels have a very special structure and useful features such as unusual volume phase transition, compatibility with biological systems, and sensitivity to environmental stimuli (temperature, pH value, electric field, light and more), which lead to many potential applications in physical and biochemical fields. This research includes: (1) the theoretical and experimental studies of polymer gels on swelling kinetics, spinodal decomposition, and solution convection in gel matrix; (2) applications of polymer gels in wound dressing, tissuesimulating optical phantom and gel display. The kinetics of gel swelling has been theoretically analyzed by considering coupled motions of both solvent and polymer network. Analytical solutions of the solvent and the network movement are derived from collective diffusion equations for a long cylindrical and a large disk gel. Kinetics of spinodal decomposition of Nisopropylacrylamide (NIPA) polymer gel is investigated using turbidity and ultrasonic techniques. By probing movement of domains, a possible timedependent gel structure in the spinodal decomposition region is presented. Theoretical studies of solution convection in gel matrix have been done and more analysis on dimensionless parameters is provided. To enhance the drug uptake and release capacity of silicone rubber (SR), NIPA hydrogel particles have been incorporated into a SR membrane. This SR/NIPA composite gel has promising attributes for wound dressing and other uses. Tissuesimulating optical phantom has been synthesized and studied using NIPA solution trapped inside a hydrogel. Polymer gels with engineered surface patterns were implemented. NIPA gel deposited on the surface of an acrylamide gel can be used as responsive gel display. A dynamically measurement technique of local shear modulus and swelling ratio of gel is presented based on an engineered periodic surface pattern as square array. digital.library.unt.edu/ark:/67531/metadc4379/
 Precision measurements of the hyperfine structure in the 23P state of 3He.
 The unusually large hyperfine structure splittings in the 23P state of the 3He isotope is measured using electrooptic techniques with high precision laser spectroscopy. Originally designed to probe the fine structure of the 4He atom, this experimental setup along with special modifications I implemented to resolve certain 3He related issues has made possible new high precision hyperfine structure measurements. Discussed are the details of the experimental setup and the modifications, including in depth information necessary to consider while performing these measurements. The results of these hyperfine structure measurements give an order of magnitude improvement in precision over the best previously reported values. digital.library.unt.edu/ark:/67531/metadc4178/
 Random growth of interfaces: Statistical analysis of single columns and detection of critical events.

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The dynamics of growth and formation of surfaces and interfaces is becoming very important for the understanding of the origin and the behavior of a wide range of natural and industrial dynamical processes. The first part of the paper is focused on the interesting field of the random growth of surfaces and interfaces, which finds application in physics, geology, biology, economics, and engineering among others. In this part it is studied the random growth of surfaces from within the perspective of a single column, namely, the fluctuation of the column height around the mean value, which is depicted as being subordinated to a standard fluctuationdissipation process with friction g. It is argued that the main properties of KardarParisiZhang theory are derived by identifying the distribution of return times to y(0) = 0, which is a truncated inverse power law, with the distribution of subordination times. The agreement of the theoretical prediction with the numerical treatment of the model of ballistic deposition is remarkably good, in spite of the finite size effects affecting this model. The second part of the paper deals with the efficiency of the diffusion entropy analysis (DEA) when applied to the studies of stromatolites. In this case it is shown that this tool can be confidently used for the detection of complexity. The connection between the two studies is established by the use of the DEA itself. In fact, in both analyses, that is, the random growth of interfaces and the study of stromatolites, the method of diffusion entropy is able to detect the real scaling of the system, namely, the scaling of the process is determined by genuinely random events, also called critical events. digital.library.unt.edu/ark:/67531/metadc4550/  Scanning Tunneling Microscopy of Homoepitaxial Chemical Vapor Deposited Diamond (100) Films

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Atomic resolution images of hottungsten filament chemicalvapordeposition (CVD) grown epitaxial diamond (100) films obtained in ultrahigh vacuum (UHV) with a scanning tunneling microscope (STM) are reported. A (2x1) dimer surface reconstruction and amorphous atomic regions were observed on the hydrogen terminated (100) surface. The (2x1) unit cell was measured to be 0.51"0.01 x 0.25"0.01 nm2. The amorphous regions were identified as amorphous carbon. After CVD growth, the surface of the epitaxial films was amorphous at the atomic scale. After 2 minutes of exposure to atomic hydrogen at 30 Torr and the sample temperature at 500° C, the surface was observed to consist of amorphous regions and (2x1) dimer reconstructed regions. After 5 minutes of exposure to atomic hydrogen, the surface was observed to consist mostly of (2x1) dimer reconstructed regions. These observations support a recent model for CVD diamond growth that is based on an amorphous carbon layer that is etched or converted to diamond by atomic hydrogen. With further exposure to atomic hydrogen at 500° C, etch pits were observed in the shape of inverted pyramids with {111} oriented sides. The temperature dependence of atomic hydrogen etching of the diamond (100) surface was also investigated using UHV STM, and it was found that it was highly temperature dependent. Etching with a diamond sample temperature of 200° C produced (100) surfaces that are atomically rough with no large pits, indicating that the hydrogen etch was isotropic at 200° C. Atomic hydrogen etching of the surface with a sample temperature of 500° C produced etchpits and vacancy islands indicating an anisotropic etch at 500° C. With a sample temperature of 1000° C during the hydrogen etch, the (100) surface was atomically smooth with no pits and few single atomic vacancies, but with vacancy rows predominantly in the direction of the dimer rows, indicating that the 1000° C etch was highly anisotropic. Raman spectroscopy was used as a temperature probe, and for determining film quality. digital.library.unt.edu/ark:/67531/metadc2446/  SpaceCharge Saturation and Current Limits in Cylindrical Drift Tubes and Planar Sheaths
 Spacecharge effects play a dominant role in many areas of physics. In highpower microwave devices using highcurrent, relativistic electron beams, it places a limit on the amount of radiation a device can produce. Because the beam's spacecharge can actually reflect a portion of the beam, the ability to accurately predict the amount of current a device can carry is needed. This current value is known as the spacecharge limited current. Because of the mathematical difficulties, this limit is typically estimated from a onedimensional theory. This work presents a twodimensional theory for calculating an upperbound for the spacecharge limited current of relativistic electron beams propagating in grounded coaxial drift tubes. Applicable to annular beams of arbitrary radius and thickness, the theory includes the effect introduced by a finitelength drift tube of circular crosssection. Using Green's second identity, the need to solve Poisson's equation is transferred to solving a SturmLiouville eigenvalue problem, which is easily solved by elementary methods. In general, the resulting eigenvalue, which is required to estimate the limiting current, must be numerically determined. However, analytic expressions can be found for frequently encountered limiting cases. Spacecharge effects also produce the fundamental collective behavior found in plasmas, especially in plasma sheaths. A plasma sheath is the transition region between a bulk plasma and an adjacent plasmafacing surface. The sheath controls the loss of particles from the plasma in order to maintain neutrality. Using a fully kinetic theory, the problem of a planar sheath with a singleminimum electric potential profile is investigated. Appropriate for single chargestate ions of arbitrary temperature, the theory includes the emission of warm electrons from the surface as well as a net current through the sheath and is compared to particleincell simulations. Approximate expressions are developed for estimating the sheath potential as well as the transition to spacecharge saturation. The case of a spacecharge limited sheath is discussed and compared to the familiar ChildLangmuir law. digital.library.unt.edu/ark:/67531/metadc2598/
 A Statistical Study of Hard XRay Solar Flares
 The results of a statistical study of hard xray solar flares are presented in this dissertation. Two methods of analysis were used, the Diffusion Entropy (DE) method coupled with an analysis of the data distributions and the Rescaled Range (R/S) Method, sometimes referred to as "Hurst's method". Chapter one provides an introduction to hard xray flares within the context of the solar environment and a summary of the statistical paradigms solar astronomers currently work under. Chapter two presents the theory behind the DE and R/S methods. Chapter three presents the results of the two analysis methodologies: most notably important evidence of the conflicting results of the R/S and DE methods, evidence of a Levy statistical signature for the underlying dynamics of the hard xray flaring process and a possible separate memory signature for the waiting times. In addition, the stationary and nonstationary characteristics of the waiting times and peak intensities, are revealed. Chapter four provides a concise summary and discussion of the results. digital.library.unt.edu/ark:/67531/metadc3045/
 The stopping of energetic Si, P and S ions in Ni, Cu, Ge and GaAs targets.

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Accurate knowledge of stopping powers is essential for these for quantitative analysis and surface characterization of thin films using ion beam analysis (IBA). These values are also of interest in radiobiology and radiotherapy, and in ion implantation technology where shrinking feature sizes puts high demands on the accuracy of range calculations. A theory that predicts stopping powers and ranges for all projectiletarget combinations is needed. The most important database used to report the stopping powers is the SRIM/TRIM program developed by Ziegler and coworkers. However, other researchers report that at times, these values differ significantly from experimental values. In this study the stopping powers of Si, P and S ions have been measured in Ni, Cu, Ge and GaAs absorbers in the energy range ~ 210 MeV. For elemental films of Ni, Cu and Ge, the stopping of heavy ions was measured using a novel ERD (Elastic Recoil Detection) based technique. In which an elastically recoiled lighter atom is used to indirectly measure the energy of the incoming heavy ion using a surface barrier detector. In this way it was possible to reduce the damage and to improve the FWHM of the detector. The results were compared to SRIM2000 predictions and other experimental measurements. A new technique derived from Molecular Beam Epitaxy (MBE) was developed to prepare stoichiometric GaAs films on thin carbon films for use in transmission ion beam experiments. The GaAs films were characterized using Xray Photoelectron Spectroscopy (XPS) and Particle Induced Xray Emission (PIXE). These films were used to investigate the stopping powers of energetic heavy ions in GaAs and to provide data for the calculation of BetheBloch parameters in the framework of the Modified BetheBloch theory. As a result of this study, stopping power data are available for the first time for Si and P ions in the energy range 210 MeV stopping in GaAs absorbers. digital.library.unt.edu/ark:/67531/metadc3004/  Studying Interactions of Gas Molecules with Nanomaterials Loaded in a Microwave Resonant Cavity
 A resonant cavity operating in TE011 mode was used to study the adsorption response of single walled carbon nanotubes (SWCNTs) and other nanomaterials for different types of gas molecules. The range of the frequency signal as a probe was chosen as geometry dependent range between 9.1 9.8 GHz. A highly specific range can be studied for further experiments dependent on the type of molecule being investigated. It was found that for different pressures of gases and for different types of nanomaterials, there was a different response in the shifts of the probe signal for each cycle of gassing and degassing of the cavity. This dissertation suggests that microwave spectroscopy of a complex medium of gases and carbon nanotubes can be used as a highly sensitive technique to determine the complex dielectric response of different polar as well as nonpolar gases when subjected to intense electromagnetic fields within the cavity. Also, as part of the experimental work, a range of other microporous materials was tested using the residual gas analysis (RGA) technique to determine their intrinsic absorption/adsorption characteristics when under an ultrahigh vacuum environment. The scientific results obtained from this investigation, led to the development of a chemical biological sensor prototype. The method proposed is to develop operational sensors to detect toxin gases for homeland security applications and also develop sniffers to detect toxin drugs for law enforcement agency personnel. digital.library.unt.edu/ark:/67531/metadc4009/