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 Department: Chemistry
 Year: 2004
 Collection: UNT Scholarly Works
Function of Conserved Residues of Human Glutathione Synthetase: Implications for the ATP-grasp Enzymes

Function of Conserved Residues of Human Glutathione Synthetase: Implications for the ATP-grasp Enzymes

Date: February 27, 2004
Creator: Dinescu, Adriana; Cundari, Thomas R., 1964-; Bhansali, Vikas S.; Luo, Jia-Li & Anderson, Mary E.
Description: This article discusses human glutathione synthetase. Abstract: Glutathione synthetase is an enzyme that belongs to the glutathione synthetase ATP-binding domain-like superfamily. It catalyzes the second step in the biosynthesis of glutathione from y-glutamylcysteine and glycine in an ATP-dependent manner. Glutathione synthetase has been purified and sequenced from a variety of biological sources; still, its exact mechanism is not fully understood. A variety of structural alignment methods were applied and four highly conserved residues of human glutathione synthetase (Glu-144, Asn-146, Lys-305, and Lys-364) were identified in the binding site. The function of these was studied by experimental and computational site-directed mutagenesis. The three-dimensional coordinates for several human glutathione synthetase mutant enzymes were obtained using molecular mechanics and molecular dynamics simulation techniques, starting from the reported crystal structure of human glutathione synthetase. Consistent with circular dichroism spectroscopy, the authors' results showed no major changes to overall enzyme structure upon residue mutation. However, semiempirical calculations revealed that ligand binding is affected by these mutations. The key interactions between conserved residues and ligands were detected and found to be essential for enzymatic activity. Particularly, the negatively charged Glu-144 residue plays a major role in catalysis.
Contributing Partner: UNT College of Arts and Sciences
Synthesis and Reactivity of a Coordinatively Unsaturated Ruthenium(II) Parent Amido Complex: Studies of X-H Activation (X = H or C)

Synthesis and Reactivity of a Coordinatively Unsaturated Ruthenium(II) Parent Amido Complex: Studies of X-H Activation (X = H or C)

Date: April 27, 2004
Creator: Conner, David; Jayaprakash, K. N.; Cundari, Thomas R., 1964- & Gunnoe, T. Brent
Description: This article discusses synthesis and reactivity of a coordinatively unsaturated Ruthenium(II) parent amido complex. The five-coordinate parent amido complex (PCP)Ru(CO)(NH2) (2) (PCP = 2,6-(CH2P-tBu2)2C6H3) has been prepared by two independent routes that involve deprotonation of Ru(II) ammine complexes. Complex 2 reacts with phenylacetylene to yield the Ru(II) acetylide complex (PCP)Ru(CO)(C≡CPh) (5) and ammonia. In addition, complex 2 rapidly activates dihydrogen at room temperature to yield ammonia and the previously reported hydride complex (PCP)Ru(CO)(H). The ability of the amido complex 2 to cleave the H-H bond is attributed to the combination of a vacant coordination site for binding/activation of dihydrogen and a basic amido ligand. Complex 2 also undergoes an intramolecular C-H activation of a methyl group on the PCP ligand to yield ammonia and a cyclometalated complex. The reaction of (PCP)Ru(CO)(CI) with MeLi allows the isolation of (PCP)Ru(CO)(Me) (8), and complex 8 undergoes an intramolecular C-H activation analogous to the amido complex 2 to produce methane and the cyclometalated complex. Determination of activation parameters for the intramolecular C-H activation transformations of 2 and 8 reveal identical ∆Hǂ {18(1) kcal/mol} with ∆Sǂ = -23(4) eu and -18(4) eu, respectively. Density functional theory has been applied to the study of intermolecular activation ...
Contributing Partner: UNT College of Arts and Sciences
Ligand-field effects for the 3p photoelectron spectra of Cr2O3

Ligand-field effects for the 3p photoelectron spectra of Cr2O3

Date: May 28, 2004
Creator: Bagus, Paul S.; Ilton, Eugene S. & Rustad, James R.
Description: This article discusses ligand-field effects for the 3p photoelectron spectra of Cr2O3. A major reason for the departure of core level X-ray photoelectron spectra (XPS) of transition metal cations in oxides from the predictions of atomic models is shown to arise from ligand field splittings in the initial state of photoemission. This splitting often leads to a change in the spatial degeneracy of the initial state but the consequences of this for XPS have not been explicitly identified in prior work. Further changes arise from ligand field splittings in the core-hole final states. Results are reported for non-empirical, cluster model many body wavefunctions for the 3p XPS of Cr2O3. The agreement of the theoretical cluster model XPS with experiment is considerably improved over the pure atomic model. Furthermore, the treatment allows screening of the core hole through changes in the covalent character of the cluster orbitals. This is quite different from the usual description of screening in oxides within the framework of charge transfer configurations and it offers new insights into the role of charge transfer for satellite structure.
Contributing Partner: UNT College of Arts and Sciences
Cluster Core-Level Binding-Energy Shifts: The Role of Lattice Strain

Cluster Core-Level Binding-Energy Shifts: The Role of Lattice Strain

Date: July 2004
Creator: Richter, B.; Kuhlenbeck, H.; Freund, H.-J. & Bagus, Paul S.
Description: This article discusses cluster core-level binding-energy shifts. Abstract: Our combined experimental and theoretical analysis of the shifts, with particle size, of core-level binding energies (BE's) of metal nanoparticles on insulating supports, shows that these shifts have an important initial state contribution arising, in large part, because of lattice strain. This contribution of BE shifts has not been recognized previously. Lattice strain changes the chemical bonding between the metal atoms and this change induces BE shifts.
Contributing Partner: UNT College of Arts and Sciences
Experimental and Computational Studies of Ruthenium(II)-Catalyzed Addition of Arene C-H Bonds to Olefins

Experimental and Computational Studies of Ruthenium(II)-Catalyzed Addition of Arene C-H Bonds to Olefins

Date: September 10, 2004
Creator: Lail, Marty; Bell, Christen M.; Conner, David; Cundari, Thomas R., 1964-; Gunnoe, T. Brent & Petersen, Jeffrey L.
Description: This article discusses experimental and computational studies of Ruthenium(II)-Catalyzed addition of arene C-H bonds to olefins. Abstract: Hydroarylation reactions of olefins are catalyzed by the octahedral Ru(II) complex TpRu-(CO)(NCMe)(Ph) (1) (Tp = hydridotris(pyrazolyl)borate). Experimental studies and density functional theory calculations support a reaction pathway that involves initial acetonitrile/olefin ligand exchange and subsequent olefin insertion into the ruthenium-phenyl bond. Metal-mediated C-H activation of arene to form a Ru-aryl bond with release of alkyl arene completes the proposed catalytic cycle. The cyclopentadienyl complex CpRu(PPh3)2(Ph) produces ethylbenzene and styrene from a benzene/ethylene solution at 90 ˚C; however, the transformation is not catalytic. A benzene solution of (PCP)Ru(CO)(Ph) (PCP = 2,6-)CH2Pt-Bu2)2C6H3) and ethylene at 90 ˚C produces styrene in 12% yield without observation of ethylbenzene. Computational studies (DFT) suggest that the C-H activation step does not proceed through the formation of a Ru(IV) oxidative addition intermediate but rather occurs by a concerted pathway.
Contributing Partner: UNT College of Arts and Sciences
Reversible Beta-Hydrogen Elimination of Three-Coordinate Iron(II) Alkyl Complexes: Mechanistic and Thermodynamic Studies

Reversible Beta-Hydrogen Elimination of Three-Coordinate Iron(II) Alkyl Complexes: Mechanistic and Thermodynamic Studies

Date: October 1, 2004
Creator: Vela, Javier; Vaddadi, Sridhar; Cundari, Thomas R., 1964-; Smith, Jeremy M.; Gregory, Elizabeth A.; Lachicotte, Rene J. et al
Description: This article discusses reversible beta-hydrogen elimination of three-coordinate iron(II) alkyl complexes. High-spin organometallic complexes have not received extensive mechanistic study, despite their potential importance as unsaturated intermediates in catalytic transformations. The authors have found that, with a suitably bulky bidentate ligand, three-coordinate, high-spin alkyl complexes of iron(II) are stable. They undergo isomerization and exchange reactions of the alkyl group through β-hydride elimination and reinsertion, and the β-hydride elimination step is rate-limiting. The alkyl complexes transfer a β-hydrogen atom to C=C, C=N, and C=O double bonds and undergo deprotonation by Brønsted acids. The reversible β-hydride elimination reactions can be used to explore relative M-C bond energies. Competition experiments and density functional calculations demonstrate an enthalpic preference for alkyl isomers with iron bound to the terminal carbon of the alkyl fragment. This preference arises from steric and electronic effects. The steric preference could be overcome with a phenyl substituent, which steers iron to the benzylic position. A Hammett correlation and density functional calculations suggest that the substituent effect is attributable to resonance stabilization of partial negative charge on the alkyl ligand.
Contributing Partner: UNT College of Arts and Sciences
Reactions of TpRu(CO) (NCMe) (Me) (Tp = Hydridotris(pyrazolyl)borate) with Heteroaromatic Substrates: Stoichiometric and Catalytic C-H Activation

Reactions of TpRu(CO) (NCMe) (Me) (Tp = Hydridotris(pyrazolyl)borate) with Heteroaromatic Substrates: Stoichiometric and Catalytic C-H Activation

Date: October 15, 2004
Creator: Pittard, Karl A.; Lee, John P.; Cundari, Thomas R., 1964-; Gunnoe, T. Brent & Petersen, Jeffrey L.
Description: This article discusses reactions of TpRu(CO)(NCMe)(Me) (Tp = Hydridotris(pyrazolyl)borate) with heteroaromatic substrates. The Ru(II) complex TpRu(CO)(NCMe)(Me) (Tp = hydridotris(pyrazolyl)borate) initiates carbon-hydrogen bond activation at the 2-position of furan and thiophene to produce methane and TpRu(CO)(NCMe)(aryl) (aryl = 2-furyl or 2-thienyl). Solid-state structures have been determined for TpRu(CO)(NCMe)(2-thienyl) and [TpRu(CO)(μ-C,S-thienyl)]2. The complex TpRu(CO)(NCMe)(2-furyl) serves as a catalyst for the formation of 2-ethylfuran from ethylene and furan. DFT calculations of the C-H activation of furan by {(Tab)Ru-(CO)(Me)} (Tab = tris(azo)borate) indicate that the C-H activation sequence does not proceed through a Ru(IV) oxidative addition intermediate.
Contributing Partner: UNT College of Arts and Sciences
Rediscovery of the Elements: The Undiscovery of Vanadium

Rediscovery of the Elements: The Undiscovery of Vanadium

Date: Summer 2004
Creator: Marshall, James L., 1940- & Marshall, Virginia R.
Description: Article describing the how the original vanadium sample was misanalysed and identified as chromium. Includes tourist information regarding Paris, France.
Contributing Partner: UNT College of Arts and Sciences
Rediscovery of the Elements: The Second Discovery of Vanadium

Rediscovery of the Elements: The Second Discovery of Vanadium

Date: Autumn 2004
Creator: Marshall, James L., 1940- & Marshall, Virginia R.
Description: Article describing how vanadium was "rediscovered" in Sweden and found to be identical to del Rio's sample. Includes tourist information regarding areas relevant to this portion of vanadium's history.
Contributing Partner: UNT College of Arts and Sciences