Calculations of the Relative Energies of the 2B1g and 2A2u States of Cyclobutanetetraone Radical Cation and Radical Anion Provide Further Evidence of a 3B2u Ground State for the Neutral Molecule: A Proposed Experimental Test of the Prediction of a Triplet Ground State for (CO)4
Date: 2010
Creator: Zhou, Xin; Hrovat, David A. & Borden, Weston T., 1943-
Description: This article discusses ground states. Abstract: B3LYP, CCSD(T), and CASPT2 calculations with the 6-311+G(2df) basis set have been performed on the radical anion and radical cation of cyclobutanetetraone (1). The very similar energies computed for the 2B1g and 2A2u states of both 1·+ and 1·- indicate that the singly occupied b1g and a2u MOs in these two states of the radical cation and anion have nearly the same energies, thus supporting the previously made prediction that neutral 1 has a 3B2u ground state. Reaction of squaric acid with O.(-), followed by negative ion photoelectron spectroscopy (NIPES) on the 1.(-) thus formed, is proposed as an experimental test of the startling prediction that tetraketone (1), a molecule that would be expected to be a closed-shell singlet, actually has a triplet ground state.
Contributing Partner: UNT College of Arts and Sciences
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Calculations Predict That Carbon Tunneling Allows the Degenerate Cope Rearrangement of Semibullvalene to Occur Rapidly at Cryogenic Temperatures
Date: May 27, 2010
Creator: Zhang, Xue; Hrovat, David A. & Borden, Weston T., 1943-
Description: This article discusses carbon tunneling. Abstract: Calculations on the role of tunneling in the degenerate Cope rearrangements of semibullvalene (1) and barbaralane (3) predict that, at temperatures below 40 K, tunneling from the lowest vibrational level should make the temperature-independent rate constants k = 1.43 x 10(-3) s(-1) and k = 7.28 x 10(-9) s(-1), respectively. An experiment, using semibullvalene-2(4)-d1, is proposed to test the prediction of rapid tunneling by 1 at cryogenic temperatures.
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Calculations Predict a Large Inverse H/D Kinetic Isotope Effect on the Rate of Tunneling in the Ring Opening of Cyclopropylcarbinyl Radical
Date: October 15, 2009
Creator: Zhang, Xue; Datta, Ayan; Hrovat, David A. & Borden, Weston T., 1943-
Description: This article discusses calculations that predict a large inverse H/D kinetic isotope effect. Abstract: Tunneling rates are expected to decrease exponentially with the square root of the effective tunneling mass. Therefore, on substitution of a heavier for a lighter isotope, the observation of a large kinetic isotope effect (KIE), involving a substantial decrease in rate constant, is a commonly used diagnostic for a large contribution from quantum mechanical tunneling to a reaction. However, in this communication, the authors report the results of calculations that make the opposite prediction about some of the KIEs on the ring opening of cyclopropylcarbinyl radical (1) to 3-butene-1-y1 radical (2) by tunneling at cryogenic temperatures. Substitution of a heavier for a lighter isotope at the radical center (C1) of 1 is calculated to accelerate the rate of tunneling, giving KIEs at this carbon that are inverse. Of particular note is the authors' prediction that substitution of deuterium for both hydrogens at C1 will lead to a nearly 3-fold increase in the rate of reaction at temperatures so low that ring opening proceeds exclusively by tunneling from the lowest vibrational level.
Contributing Partner: UNT College of Arts and Sciences
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Cyclooctatetraenes Tetrakis-Annelated with α-Dithio- or α-Diselenocarbonyl Groups: Diradicals Predicted To Have Ground States with 10 π Electrons in the Eight-Membered Ring and Two-Center, Three-Electron, σ Bonds between Two Pairs of Chalcogen Atoms
Date: February 12, 2010
Creator: Zhou, Xin; Hrovat, David A. & Borden, Weston T., 1943-
Description: This article discusses cyclooctatetraenes. Abstract: (U)B3LYP calculations with the 6-31+G(d) and 6-311+G(2df) basis sets have been carried out on cyclooctatetraenes 6 and 7, in which the COT ring is tetrakis-annelated with α-dithio- or α-diselenocarbonyl groups. Transferring two electrons from the high-lying b1g and eu σ MOs in 6 and 7 into the unoccupied, nonbonding, COT π orbital is computed to be energetically favorable. The lowest D4h electronic state is calculated to be 3Eu, which formally contains 10 π electrons in the eight-membered ring and has two unpaired electrons in σ MOs. The 3Eu state undergoes a first-order Jahn-Teller distortion to form 6d and 7d, in which the pair of one-electron holes in the σ MOs is stabilized by the formation of two, two-center, three-electron bonds between pairs of chalcogen atoms that are diagonally across the eight-membered ring from each other. The corresponding open-shell singlets are computed to be about 1 kcal/mol lower in energy than the Jahn-Teller distorted triplets. Molecules 6i and 7i, in which the C-C bond in one four-membered ring is cleaved, are computed to be lower in energy than 6d and 7d. However, a substantial barrier is predicted to separate each of the two pairs of isomers ...
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Current Applications of Computational Chemistry in JACS - Molecules, Mechanisms, and Materials
Date: September 21, 2011
Creator: Borden, Weston T., 1943-
Description: This article discusses current applications of computational chemistry. This virtual issue of JACS Select is devoted to some of the computation chemistry that has recently been published in the Journal of the American Chemical Society (JACS). The 25 articles and Communications that appear in this issue of JACS Select were chosen on the basis of the enthusiasm of the referees for these manuscripts when they were reviewed, as well as on the number of times each of these articles has been accessed online since its publication. Diversity of subject matter was not a criterion used in selecting these 25 articles from the ca. 50 well-reviewed, frequently accessed articles that were initially considered. However, inspection of the list of the subjects covered - from amyloid fibril polymorphism to nucleation of amorphous calcium carbonate; from the structure of solid Li(NH3)4 to the role that solvation plays in the Thorpe-Ingold effect; and to the nonstatistical, gas-phase dynamics of [1,5] hydrogen shifts in chemically activated cyclopentadiene - reveals the diverse nature of some of the best papers in computational chemistry that have been published recently in JACS.
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Cooperative Effects in the Annelation of Benzene by Multiple Etheno Groups
Date: April 20, 2011
Creator: Bao, Xiaoguang; Hrovat, David A. & Borden, Weston T., 1943-
Description: This article discusses cooperative effects in the annelation of benzene by multiple etheno groups. Abstract: The results of B3LYP/6-31G(d) calculations show that there is a strong cooperative effect on the energies that result from annelating benzene with 1, 2, and 3 etheno groups, to form 3, 4, and 5 respectively. The etheno annelation energies have been decomposed into two major contributors - etheno annelation, with all the bonds in the six-membered ring constrained to have the same C-C bond length as in D6h benzene, and optimization of the C-C bond lengths in the annelated benzene ring. The energies computed for each of these two steps show that the etheno groups behave cooperatively in both of them. The origin of the cooperativity, calculated for each step, is described and discussed.
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With a Little Help from My Friends: Forty Years of Fruitful Chemical Collaborations
Date: March 31, 2011
Creator: Borden, Weston Thatcher
Description: This article discusses collaborations. Over the past 40 years, much of the author's research, both computational and experimental, has involved collaborations. This Perspective describes some of the author's collaborative research in eight different areas of organic and theoretical chemistry: (1) hydrocarbons containing unsaturatively, 1,3-bridged cyclobutane rings, (2) the use of orbital topology for predicting the ground states of diradicals, (3) violations of Hund's rule, (4) the chemistry of phenylnitrenes, (5) tunneling by carbon in organic reactions, (6) the Cope rearrangement and the effect of substituents on it, (7) pyramidalized alkenes, dehydrocubanes, cubyl cation, and octanitrocubane, and (8) the effects of geminal fluorine substitution at C-2 of 1,3-diradicals. Highlighted in this Perspective are the synergism between calculations and experiments in the author's research and the many different roles that serendipity has played in the collaborations that are described herein.
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Effects of Geminal Methyl Groups on the Tunnelling Rates in the Ring Opening of Cyclopropylcarbinyl Radical at Cryogenic Temperature
Date: 2011
Creator: Zhang, Xue; Hrovat, David A.; Datta, Ayan & Borden, Weston T., 1943-
Description: This article discusses the effects of geminal methyl groups on the tunnelling rates in the ring opening of cyclopropylcarbinyl radical at cryogenic temperature. Abstract: CVT + SCT calculations on the rate of tunnelling at 20 K in the ring opening of cyclopropylcarbinyl radical, substituted with geminal methyl groups at a ring carbon (1b), have been performed. The calculations predict that, contrary to expectations based on the effect of mass on the rate of tunnelling, the geminal methyl substituents in 1b should make the rate of ring opening to 1,1-dimethyl-3-butenyl radical (2b) 10(4) times faster than the rate of ring opening of unsubstituted cyclopropylcarbinyl radical (1a) to 3-butenyl radical (2a) and almost 10(6) times faster than the rate of ring opening of 1b to 2,2-dimethyl1-3-butenyl radical (2c). The reasons for these unexpected findings are discussed.
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Through-Bond Interactions in the Diradical Intermediates Formed in the Rearrangements of Bicyclo[n.m.0]alkatetraenes
Date: September 24, 2010
Creator: Lovitt, Charity Flener; Dong, Hao; Hrovat, David A.; Gleiter, Rolf & Borden, Weston Thatcher
Description: This article discusses through-bond interactions. The intermediates and transition structures in the degenerate thermal rearrangements of bicyclo[4.4.0]deca-2,4,7,9-tetraene (1c), bicyclo[5.5.0]dodeca-2,4,8,10-tetraene(11b), and bicyclo[5.4.0]undeca-2.4.8.10-tetraene (14) have been located by (U)B3LYP/6-31G(d) calculations. The singlet-triplet energy differences (∆Est) in the diradical intermediates (tricyclo[4.4.0.02,7]deca-3,8-dien-5,10-diyl (2c), tricyclo[5.5.0.05,11]dodeca-2,8-dien-4,10-diyl (12b), and tricyclo[5.4.0.05,11]undeca-2,8-dien-4,10-diyl(15)) have been computed, using both UB3LYP and (6/6)CASPT2 calculations. ∆Est in 2c, in which a four-membered ring is anti-bridged by two allylic radicals, is computed to be larger by a factor of 5 than ∆Est in 15, in which the anti-bridged ring is five-membered, and by a factor of 10 than that in 12b, in which the anti-bridged ring is six-membered. The reasons for the much larger interaction between two allylic radicals through the bonds of the four-membered ring in 2c than through the bonds of the five-membered ring in 15 or the six-membered ring in 12b are discussed, and the consequences of the large, through-bond stabilization of the singlet state of 2c are described.
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Photoelectron Spectroscopic Study of the Oxyallyl Diradical
Date: February 16, 2011
Creator: Ichino, Takatoshi; Villano, Stephanie M.; Gianola, Adam J.; Goebbert, Daniel J.; Velarde, Luis; Sanov, Andrei et al
Description: This article discusses photoelectron spectroscopic study of the oxyallyl diradical. The photoelectron spectrum of the oxyallyl (OXA) radical anion has been measured. The radical anion has been generated in the reaction of the atomic oxygen radical anion (O߭߫) with acetone. Three low-lying electronic states of OXA have been observed in the spectrum. Electronic structure calculations have been performed for the triplet states (3B2 and 3B1) of OXA and the ground doublet state (2A2) of the radical anion using density functional theory (DFT). Spectral simulations have been carried out for the triplet states based on the results of the DFT calculations. The simulations identifies a vibrational progression of the CCC bending mode of the 3B2 state of OXA in the lower electron binding energy (eBE) portion of the spectrum. On top of the 3B2 feature, however, the experimental spectrum exhibits additional photo-electron peaks whose angular distribution is distinct from that for the vibronic peaks of the 3B2 state. Complete active space self-consistent field (CASSCF) method and second-order perturbation theory based on the CASSCF wave function (CASPT2) have been employed to study the lowest singlet state (1A1) of OXA. The simulation based on the results of these electronic structure calculations establishes that ...
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