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  Partner: UNT College of Arts and Sciences
 Department: Biological Sciences
 Collection: UNT Scholarly Works
Remote Sensing and GIS for Nonpoint Source Pollution Analysis in the City of Dallas' Eastern Watersheds

Remote Sensing and GIS for Nonpoint Source Pollution Analysis in the City of Dallas' Eastern Watersheds

Date: June 1989
Creator: University of North Texas. Department of Biological Sciences.
Description: This report describes the findings of a study conducted on the Eastern Watersheds of Lake Lavon, Lake Ray Hubbard, Lake Tawakoni, Lake Palestine and Lake Fork, which are located within the Blackland Prairie, Post Oak Savannah and Pineywoods provinces. These watersheds are among nine that provide drinking water to Dallas, Texas. The study examines the potential benefit of "remote sensing and geographic information systems (GIS) for watershed management" in these five watersheds (p. iii).
Contributing Partner: UNT College of Arts and Sciences
Remote Sensing and GIS for Nonpoint Source Pollution Analysis in the City of Dallas' Western Watersheds

Remote Sensing and GIS for Nonpoint Source Pollution Analysis in the City of Dallas' Western Watersheds

Date: August 1988
Creator: University of North Texas. Department of Biological Sciences.
Description: This report describes the findings of a study conducted on the watersheds of "Lake Lewisville, Lake Ray Roberts, Lake Grapevine and the Elm Fork of the Trinity River between Lake Lewisville and Frazier Dam," which are all part of the upper Trinity drainage basin (p. 31). The study examines the potential benefit of "remote sensing and geographic information systems (GIS) for watershed management" in and around Dallas, Texas (p. i).
Contributing Partner: UNT College of Arts and Sciences
An IRE-Like AGC Kinase Gene, MtIRE, Has Unique Expression in the Invasion Zone of Developing Root Nodules in Medicago truncatula

An IRE-Like AGC Kinase Gene, MtIRE, Has Unique Expression in the Invasion Zone of Developing Root Nodules in Medicago truncatula

Date: June 2007
Creator: Pislariu, Catalina I. & Dickstein, Rebecca
Description: This article discusses AGC kinase genes. The authors report here the isolation and characterization of the first AGC kinase gene identified in Medicago truncatula, MtIRE.
Contributing Partner: UNT College of Arts and Sciences
LIN, a Medicago truncatula Gene Required for Nodule Differentiation and Persistence of Rhizobial Infections

LIN, a Medicago truncatula Gene Required for Nodule Differentiation and Persistence of Rhizobial Infections

Date: November 2004
Creator: Kuppusamy, Kavitha T.; Endre, Gabriella; Prabhu, Radhika; Penmetsa, R. Varma; Veereshlingam, Harita; Cook, Douglas R. et al.
Description: Article on LIN, a Medicago truncatula gene required for nodule differentiation and persistence of rhizobial infections.
Contributing Partner: UNT College of Arts and Sciences
Control of Root Architecture and Nodulation by the LATD/NIP Transporter

Control of Root Architecture and Nodulation by the LATD/NIP Transporter

Date: November 2010
Creator: Harris, Jeanne M. & Dickstein, Rebecca
Description: Article discussing research on control of root architecture and nodulation by the LATD/NIP transporter.
Contributing Partner: UNT College of Arts and Sciences
Rapid Analysis of Legume Root Nodule Development Using Confocal Microscopy

Rapid Analysis of Legume Root Nodule Development Using Confocal Microscopy

Date: 2004
Creator: Haynes, Janine G.; Czymmek, Kirk J.; Carlson, Carol A.; Veereshlingam, Harita; Dickstein, Rebecca & Sherrier, D. Janine
Description: This article discusses the rapid analysis of legume root nodule development using confocal microscopy.
Contributing Partner: UNT College of Arts and Sciences
A Putative Transporter is Essential for Integrating Nutrient and Hormone Signaling with Lateral Root Growth and Nodule Development in Medicago truncatula

A Putative Transporter is Essential for Integrating Nutrient and Hormone Signaling with Lateral Root Growth and Nodule Development in Medicago truncatula

Date: 2010
Creator: Yendrek, Craig R.; Lee, Yi-Ching; Morris, Viktoriya; Liang, Yan; Pislariu, Catalina I.; Burkart, Graham et al.
Description: This article discusses a putative transporter for integrating nutrient and hormone signaling with lateral root growth and nodule development in Medicago truncatula.
Contributing Partner: UNT College of Arts and Sciences
The AGC Kinase MtIRE: A Link to Phospholipid Signaling During Nodulation?

The AGC Kinase MtIRE: A Link to Phospholipid Signaling During Nodulation?

Date: 2007
Creator: Pislariu, Catalina I. & Dickstein, Rebecca
Description: Article discussing the AGC Kinase gene MtIRE and the possibility of a link to phospholipid signaling during nodulation.
Contributing Partner: UNT College of Arts and Sciences
ESTPiper - a web-based analysis pipeline for expressed sequence tags

ESTPiper - a web-based analysis pipeline for expressed sequence tags

Date: April 21, 2009
Creator: Tang, Zuojian; Choi, Jeong-Hyeon; Hemmerich, Chris; Sarangi, Ankita; Colbourne, John K. & Dong, Qunfeng
Description: Article discussing ESTPiper, a web interface that streamlines the expressed sequence tags (EST) analysis process.
Contributing Partner: UNT College of Arts and Sciences
Tracembler - software for in-silico chromosome walking in unassembled genomes

Tracembler - software for in-silico chromosome walking in unassembled genomes

Date: May 2007
Creator: Dong, Qunfeng; Wilkerson, Matthew D. & Brendel, Volker
Description: Article discussing Tracembler, a software for in-silico chromosome walking in unassembled genomes.
Contributing Partner: UNT College of Arts and Sciences
GSV: a web-based genome synteny viewer for customized data

GSV: a web-based genome synteny viewer for customized data

Date: 2011
Creator: Revanna, Kashi V.; Chiu, Chi-Chen; Bierschank, Ezekiel & Dong, Qunfeng
Description: Article discussing the genome synteny viewer (GSV), a web-based viewer providing a unique option for biologists to analyze genome synteny by uploading their own data set to a web-based comparative genome browser.
Contributing Partner: UNT College of Arts and Sciences
BOV - a web-based BLAST output visualization tool

BOV - a web-based BLAST output visualization tool

Date: September 15, 2008
Creator: Gollapudi, Rajesh; Revanna, Kashi V.; Hemmerich, Chris; Schaack, Sarah & Dong, Qunfeng
Description: Article discussing research on BOV, a web-based BLAST output visualization tool.
Contributing Partner: UNT College of Arts and Sciences
Genome-wide mutagenesis of Zea mays L. using RescueMu transposons

Genome-wide mutagenesis of Zea mays L. using RescueMu transposons

Date: 2004
Creator: Fernandes, John; Dong, Qunfeng; Schneider, Bret; Morrow, Darren J.; Nan, Guo-Ling; Brendel, Volker et al.
Description: This article discusses genome-wide mutagenesis of Zea mays L. using RescueMu transposons.
Contributing Partner: UNT College of Arts and Sciences
xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Date: November 20, 2006
Creator: Schlueter, Shannon D.; Wilkerson, Matthew D.; Dong, Qunfeng & Brendel, Volker
Description: Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.
Contributing Partner: UNT College of Arts and Sciences
RICHEST - a web server for richness estimation in biological data

RICHEST - a web server for richness estimation in biological data

Date: February 27, 2009
Creator: Durden, Chris & Dong, Qunfeng
Description: Article discussing a web server for richness estimation in biological data called RICHness ESTimator (RICHEST).
Contributing Partner: UNT College of Arts and Sciences
TableMaker: An ad hoc Query Tool for Relational Databases

TableMaker: An ad hoc Query Tool for Relational Databases

Date: July 2008
Creator: Lushbough, Carol; Duvick, Jon; Dong, Qunfeng; Jennewein, Douglas; Reynoldson, Joe & Brendel, Volker
Description: This paper discusses an ad hoc query tool for relational databases. Most Web servers hosting biological data limit users to a defined set of search options and output formats that are short of the whole range of options available to users with direct database access. However, to make full use of the wealth of data in the database resource, it is desirable to have an intermediate solution that provides a broad range of flexible query and output options through a Web portal.
Contributing Partner: UNT College of Arts and Sciences
Functional Characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter by Tissue-Specific Complementation Reveals an Essential Role in Phloem Loading But Not in Long-Distance Transport

Functional Characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter by Tissue-Specific Complementation Reveals an Essential Role in Phloem Loading But Not in Long-Distance Transport

Date: September 2008
Creator: Srivastava, Avinash C.; Ganesan, Savita; Ismail, Ihab O. & Ayre, Brian G.
Description: This article discusses functional characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter.
Contributing Partner: UNT College of Arts and Sciences
Comparative Plant Genomics Resources at Plant GDB

Comparative Plant Genomics Resources at Plant GDB

Date: October 2005
Creator: Dong, Qunfeng; Lawrence, Carolyn J.; Schlueter, Shannon D.; Wilkerson, Matthew D.; Kurtz, Stefan; Brendel, Volker et al.
Description: Article on comparative plant genomics resources at plant GDB.
Contributing Partner: UNT College of Arts and Sciences
The Ecoresponsive Genome of Daphnia pulex

The Ecoresponsive Genome of Daphnia pulex

Date: February 4, 2011
Creator: Colbourne, John K.; Pfrender, Michael E.; Gilbert, Donald; Thomas, W. Kelley; Tucker, Abraham; Oakley, Todd H. et al.
Description: This article discusses the ecoresponsive genome of Daphnia pulex.
Contributing Partner: UNT College of Arts and Sciences
The Microbial Communities in Male First Catch Urine Are Highly Similar to Those in Paired Urethral Swab Specimens

The Microbial Communities in Male First Catch Urine Are Highly Similar to Those in Paired Urethral Swab Specimens

Date: May 13, 2011
Creator: Dong, Qunfeng; Nelson, David E.; Toh, Evelyn; Diao, Lixia; Gao, Xiang; Fortenberry, J. Dennis et al.
Description: Article discussing the microbial communities in male first catch urine and how these are highly similar to those paired in urethral swab specimens.
Contributing Partner: UNT College of Arts and Sciences
Using WebGBrowse to Visualize Genome Annotation on GBrowse

Using WebGBrowse to Visualize Genome Annotation on GBrowse

Date: March 2010
Creator: Podicheti, Ram & Dong, Qunfeng
Description: Article discussing using WebGBrowse to visualize genome annotation on GBrowse.
Contributing Partner: UNT College of Arts and Sciences
Multiple domains in MtENOD8 protein including the signal peptide target it to the symbiosome

Multiple domains in MtENOD8 protein including the signal peptide target it to the symbiosome

Date: May 2012
Creator: Meckfessel, Matthew H.; Blancaflor, Elison B.; Plunkett, Michael; Dong, Qunfeng & Dickstein, Rebecca
Description: Article presenting evidence from GFP fusion experiments that the MtENOD8 protein contains at least three symbiosome targeting domains, including its N-terminal signal peptide (SP).
Contributing Partner: UNT College of Arts and Sciences
Characteristic Male Urine Microbiomes Associate with Asymptomatic Sexually Transmitted Infection

Characteristic Male Urine Microbiomes Associate with Asymptomatic Sexually Transmitted Infection

Date: November 2010
Creator: Nelson, David E.; Van Der Pol, Barbara; Dong, Qunfeng; Revanna, Kashi V.; Fan, Baochang; Easwaran, Shraddha et al.
Description: Article discussing research on characteristic male urine microbiomes associated with asymptomatic sexually transmitted infection.
Contributing Partner: UNT College of Arts and Sciences
Effective carbon partitioning driven by exotic phloem-specific regulatory elements fused to the Arabidopsis thaliana AtSUC2 sucrose-proton symporter gene

Effective carbon partitioning driven by exotic phloem-specific regulatory elements fused to the Arabidopsis thaliana AtSUC2 sucrose-proton symporter gene

Date: January 20, 2009
Creator: Srivastava, Avinash C.; Ganesan, Savita; Ismail, Ihab O. & Ayre, Brian G.
Description: This article discusses the effect and overall importance of the Arabidopsis thaliana AtSUC2 sucrose-proton symporter gene on carbon partitioning and plant growth.
Contributing Partner: UNT College of Arts and Sciences
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