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open access

xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Description: Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.
Date: November 20, 2006
Creator: Schlueter, Shannon D.; Wilkerson, Matthew D.; Dong, Qunfeng & Brendel, Volker
Partner: UNT College of Arts and Sciences
open access

Functional Characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter by Tissue-Specific Complementation Reveals an Essential Role in Phloem Loading But Not in Long-Distance Transport

Description: This article discusses functional characterization of the Arabidopsis AtSUC2 Sucrose/H+ Symporter.
Date: September 2008
Creator: Srivastava, Avinash C.; Ganesan, Savita; Ismail, Ihab O. & Ayre, Brian G.
Partner: UNT College of Arts and Sciences
open access

TableMaker: An ad hoc Query Tool for Relational Databases

Description: This paper discusses an ad hoc query tool for relational databases. Most Web servers hosting biological data limit users to a defined set of search options and output formats that are short of the whole range of options available to users with direct database access. However, to make full use of the wealth of data in the database resource, it is desirable to have an intermediate solution that provides a broad range of flexible query and output options through a Web portal.
Date: July 2008
Creator: Lushbough, Carol; Duvick, Jon; Dong, Qunfeng; Jennewein, Douglas; Reynoldson, Joe & Brendel, Volker
Partner: UNT College of Arts and Sciences
open access

Enabling Large Scale Scientific Computations for Expressed Sequence Tag Sequencing over Grid and Cloud Computing Clusters

Description: This paper discusses expressed sequence tag sequencing over grid and cloud computing clusters, specifically for biological applications. In this paper, the authors propose a Web service framework for high-level job scheduling that is developed for scientific applications.
Date: September 2009
Creator: Pallickara, Sangmi Lee; Pierce, Marlon; Dong, Qunfeng & Kong, ChinHua
Partner: UNT College of Arts and Sciences
open access

Effective carbon partitioning driven by exotic phloem-specific regulatory elements fused to the Arabidopsis thaliana AtSUC2 sucrose-proton symporter gene

Description: This article discusses the effect and overall importance of the Arabidopsis thaliana AtSUC2 sucrose-proton symporter gene on carbon partitioning and plant growth.
Date: January 20, 2009
Creator: Srivastava, Avinash C.; Ganesan, Savita; Ismail, Ihab O. & Ayre, Brian G.
Partner: UNT College of Arts and Sciences
open access

Functional and Phylogenetic Analyses of a Conserved Regulatory Program in the Phloem of Minor Veins

Description: This article discusses functional and phylogenetic analyses of a conserved regulatory program in the phloem of minor veins, which are developmentally and physiologically distinct from the phloem in the rest of the vascular system.
Date: November 2003
Creator: Ayre, Brian G.; Blair, Jaime E. & Turgeon, Robert
Partner: UNT College of Arts and Sciences
open access

Symplastic Continuity between Companion Cells and the Translocation Stream: Long-Distance Transport Is Controlled by Retention and Retrieval Mechanisms in the Phloem

Description: Article discussing symplastic continuity between companion cells and the translocation stream, and how long-distance transport is controlled by retention and retrieval mechanisms in the phloem.
Date: April 2003
Creator: Ayre, Brian G.; Keller, Felix & Turgeon, Robert
Partner: UNT College of Arts and Sciences
open access

Characterization of sub-nuclear changes in Caenorhabditis elegans embryos exposed to brief, intermediate and long-term anoxia to analyze anoxia-induced cell cycle arrest

Description: Article discussing research on the characterization of sub-nuclear changes in Caenorhabditis elegans embryos exposed to brief, intermediate and long-term anoxia to analyze anoxia-induced cell cycle arrest.
Date: December 20, 2005
Creator: Hajeri, Vinita A.; Trejo, Jesus & Padilla, Pamela A.
Partner: UNT College of Arts and Sciences
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