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open access

Exploring Caffeyl-Lignin Biosynthesis in Cleome hassleriana and Polymerization of Caffeyl Alcohol in Arabidopsis thaliana

Description: C-lignin (caffeyl-lignin) is a novel linear lignin polymer found in the seed coats of several non-crop plants, notably Vanilla planifolia (Vanilla), Jatropha Curcas (Jatropha), and Cleome hassleriana (Cleome). C-lignin has several advantages over normal G/S-lignin, found in the majority of lignocellulosic biomass, for valorization in the context of bioprocessing: less cross-linking to cell wall polysaccharides (less recalcitrant biomass), ordered linkages between monomers (homogeneous polymer),… more
Date: December 2019
Creator: Harkleroad, Aaron Djuanell
Partner: UNT Libraries
open access

Irrigation Methods and Their Effects on Irrigation Water Efficiency in High Tunnels

Description: Improving water efficiency is and will continue to be a top concern to meet the world food production demands for a growing population. By having a clear understanding of water efficiencies, communities will be able to address these concerns from an economic standpoint and use more productive methods to grow food and limit water consumption. This study examines the water efficiencies of three irrigation methods over a single growing season in southeastern Oklahoma. Two crops, tomatoes and cucum… more
Date: December 2019
Creator: Young, Lauren
Partner: UNT Libraries
open access

Optical Brain Imaging of Motor Cortex to Decode Movement Direction using Cross-Correlation Analysis

Description: The goal of this study is to determine the intentional movement direction based on the neural signals recorded from the motor cortex using optical brain imaging techniques. Towards this goal, we developed a cross-correlation analysis technique to determine the movement direction from the hemodynamic signals recorded from the motor cortex. Healthy human subjects were asked to perform a two-dimensional hand movement in two orthogonal directions while the hemodynamic signals were recorded from t… more
Date: December 2019
Creator: Lebel, Cynthia
Partner: UNT Libraries

Phenotype Analysis of the CISD Gene Family Relative to Mitochondrial Function in Caenorhabditis elegans

Description: NEET proteins belong to a unique class of [2Fe-2S] cluster proteins that have been shown to participate in various biological processes such as regulating iron, reactive oxygen species and apoptosis within the cell and are localized to the mitochondria. Disruption of the mitochondrial NEET proteins are associated with different human diseases such as obesity, neurodegeneration, cancer and diabetes. In humans, a missense mutation in the CISD2 gene results in a heritable multisystem disorder term… more
Access: Restricted to UNT Community Members. Login required if off-campus.
Date: December 2019
Creator: Mungwira, Chipo F
Partner: UNT Libraries
open access

Transgenerational Responses to Environmental Stressors in Vertebrates: From Organisms to Molecules

Description: Genomic modifications occur slowly across generations, whereas short-term epigenetic transgenerational inheritance of adaptive phenotypes may be immediately beneficial to large numbers of individuals, acting as a bridge for survival when adverse environments occur. In this study we used dietary exposure to crude oil as an example of an environmental stressor to assess its effects from the molecular to the organismal levels in piscine and avian animal models. In addition, we assessed the role of… more
Date: December 2019
Creator: Martinez Bautista, Naim
Partner: UNT Libraries
open access

Transient Expression of BABY BOOM, WUSCHEL, and SHOOT MERISTEMLESS from Virus-Based Vectors in Cotton Explants: Can We Accelerate Somatic Embryogenesis to Improve Transformation Efficiency?

Description: Upland cotton (Gossypium hirsutum L.) is the world's most prominent fiber crop. Cotton transformation is labor intensive and time consuming, taking 12 to 18 months for rooted T0 plants. One rate limiting step is the necessary production of somatic embryos. In other recalcitrant species, ectopic expression of three genes were shown to promote somatic embryogenesis: WUSCHEL (WUS), SHOOT MERISTEMLESS (STM), and BABY BOOM (BBM). WUS is responsible for maintaining stem-cell fate in shoot and floral … more
Date: December 2019
Creator: Alejos, Marcos
Partner: UNT Libraries

Ceramide Biosynthesis and NEET Proteins Impact Development, Function, and Maintenance of the Caenorhabditis elegans Germline

Description: I used the C. elegans genetic model to examine the role of ceramide biosynthesis (sphingolipid pathway) and iron regulation and found that each process impacts germline development and function. Using a sphingolipid specific antibody mAb15B4, I found that sphingolipids are associated with germ granules (P granules) within C. elegans and zebrafish; thus, suggesting conservation of macromolecules associated with germ granules. Phenotype analysis of ceramide biosynthesis mutants in C. elegans reve… more
Access: Restricted to UNT Community Members. Login required if off-campus.
Date: August 2019
Creator: King, Skylar Dawn
Partner: UNT Libraries

The Metabolic Physiology of Planarian Flatworms

Description: Using a high throughput closed respirometry method to measure oxygen consumption, I determined metabolic rates in asexual and sexual Schmidtea mediterranea and Girardia dorotocephala, as a function of temperature, taxon, stressors, reproductive mode, age, regeneration, and specific dynamic action. This study has shown that oxygen consumption can reliably be measured in planaria using optode closed respirometry, and also provided a reliable method for measuring wet mass in planaria, which has be… more
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Date: August 2019
Creator: Lewallen, Melissa A
Partner: UNT Libraries
open access

Spatial Variations and Cultural Explanations to Obesity in Ghana

Description: While obesity is now recognized as a major health concern in Ghana, the major drivers, causal factors, and their spatial variation remain unclear. Nutritional changes and lack of physical activity are frequently blamed but the underlying factors, particularly cultural values and practices, remain understudied. Using hot spot analysis and spatial autocorrelation, this research investigates the spatial patterns of obesity in Ghana and the explanatory factors. We also use focus group discussions t… more
Date: August 2019
Creator: Asubonteng, Agnes
Partner: UNT Libraries
open access

American Lawn Addictions: Effects of Environmental Education on Student Preferences for Xeriscaping as an Alternative in North Central Texas, USA

Description: Urban land use and land cover has changed in the USA, giving rise to the American lawn – manicured, resource-intensive, and non-native. Green infrastructure design has been suggested in the literature as a potential alternative to the American lawn when managed as native xeriscapes, which require little to no irrigation after establishment. Given the influence of public preference on landscaping decisions, what is the relationship between the perceived value and ecological benefits of the Ameri… more
Date: May 2019
Creator: Williams, Jared L.
Partner: UNT Libraries
open access

Antimicrobial and Anti-Platelet Activity in Botanical Extracts of Plants Collected in Northern Thailand

Description: The purpose of my research work was to assess a variety of Northern Thailand plants tissue extracts for antibacterial and anti-platelet aggregation activity. The Minimum Inhibitory Concentration assay method was used to assess antimicrobial activity of plant extracts, while the Zebrafish Platelet Aggregation Assay and the in vitro Whole Human Blood Impedance Aggregation Assay were used to study anti-platelet activity. Forty one plant extracts harvested from the tissues of 26 plants collected fr… more
Date: May 2019
Creator: Patcharapinyopong, Thanasan
Partner: UNT Libraries
open access

The Bobwhite Population Decline: Its History, Genetic Consequences, and Studies on Techniques for Locating and Assessing Current Populations

Description: The northern bobwhite (Colinus virginianus) population decline is a severe, rangewide phenomenon beginning >150 years ago and continuing today. In this investigation, I: 1. document the timeline of bobwhite population decline and unintended genetic consequences of attempted remedies, 2) develop a model useful for predicting possible locations of potentially sustainable bobwhite populations in semiarid rangeland in Texas and Oklahoma, and 3) examine the relationship between population monitoring… more
Date: May 2019
Creator: Whitt, Jeffrey Glen
Partner: UNT Libraries
open access

Comparison and Genetic Analysis of Host Specificity in Cluster BD1 Bacteriophages infecting Streptomyces

Description: Bacteriophages are viruses that specifically infect bacteria. When a phage infects a bacterium, it attaches itself to the surface of the bacteria and injects its DNA into the intracellular space. The phage DNA hijacks the cellular machinery of the bacteria and forces it to produce phage proteins. Eventually, the bacteria cell bursts or lyses, releasing new phage. The bacteria act as a host for phage reproduction. The ability for a phage to infect multiple bacterial species is known as host rang… more
Date: May 2019
Creator: Klug, Hannah
Partner: UNT Libraries

Defining Components Linked to Bacterial Nutritional Utilization of Cyanide as a Sole Nitrogen Source

Description: One of the challenges in biology is placing a function on the myriad of gene sequences having become available from rapid advances in genome sequencing. One such example is a gene cluster (Nit1C) found in bacteria that is tied to the unusual ability of certain bacteria to grow when supplied cyanide as the sole nitrogen source. The term cyanotrophs has been applied to such bacteria, for which a genetic linkage between cyanotrophy and Nit1C was demonstrated for 10 separate bacteria. In additio… more
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Date: May 2019
Creator: Jones, Lauren Brittany
Partner: UNT Libraries
open access

Exploration of Genome Length, Burst Time, and Burst Size of Streptomyces griseus Bacteriophages

Description: Since phages use the host resources to replicate themselves after infection, the different sizes of the phage genome should influence the replication rate. We, therefore, hypothesized that the smaller genomes should burst the cell faster than the larger ones. As well, the shorter genomes would have greater burst sizes because they should replicate faster. Here, we obtained 16 phages of various genome length. All phages were isolated on Streptomyces griseus and available in our phage bank at the… more
Date: May 2019
Creator: Maneekul, Jindanuch
Partner: UNT Libraries
open access

Isolation and Bioinformatic Characterization of Four Novel Bacteriophages from Streptomyces toxytricini

Description: Six initial phage isolates with high titer lysates were obtained using Streptomyces toxytricini B-5426 as the host bacterium. These isolates were named Goby, Toma, Yosif, Yara, Deema, and Hsoos. However, upon completion of the sequencing, it was found that the Yara and Hsoos isolates were identical, as were Goby and Deema. As a result, final analysis was completed on only the four unique isolates. All of the phages mentioned above were isolated from soil samples from different locations. Al… more
Date: May 2019
Creator: Alzaid, Hessah
Partner: UNT Libraries
open access

Autonomic Nerve Activity and Cardiovascular Function in the Chicken Embryo (Gallus gallus)

Description: The goal of this study was to build on the historic use of the avian model of development and also to further the knowledge of autonomic nervous system (ANS) regulation of cardiovascular function in vertebrates. Vasoactive drugs sodium nitroprusside, a vasodilator and phenylephrine, a vasoconstrictor were used to study the correlation of cardiovascular function relationship with nerve activity, both sympathetic and parasympathetic (vagal). Additionally, ANG II was used to assess its effects on … more
Date: December 2018
Creator: Onyemaechi, Clinton
Partner: UNT Libraries
open access

Compartmentalization of Jojoba Seed Lipid Metabolites

Description: Seeds from the desert shrub Simmondsia chinensis (jojoba) are one of the only known natural plant sources to store a majority of its oil in the form of liquid wax esters (WE) instead of triacylglycerols (TAGs) and these oils account for ~55% of the seed weight. Jojoba oil is highly valued as cosmetic additives and mechanical lubricants, yet despite its value much is still unknown about its neutral lipid biosynthetic pathways and lipid droplet packaging machinery. Here, we have used a multi-"omi… more
Date: December 2018
Creator: Sturtevant, Drew
Partner: UNT Libraries
open access

Isolation and Genomic Characterization of 45 Novel Bacteriophages Infecting the Soil Bacterium Streptomyces griseus

Description: Bacteriophages, or simply "phages," are the most abundant biological entities on the planet and are thought to be the largest untapped reservoir of available genetic information. They are also important contributors to both soil health and nutrient recycling and have significantly influenced our current understanding of molecular biology. Bacteria in the genus Streptomyces are also known to be important contributors to soil health, as well as producing a number of useful antibiotics. The geneti… more
Date: December 2018
Creator: Hale, Richard
Partner: UNT Libraries
open access

Key Factors Influencing Retention Rates among Historically Underrepresented Student Groups in STEM Fields

Description: The aim of the study was to identify the factors that have an influence on the completion rates of undergraduate students in the fields of science, technology, engineering and mathematics (STEM). Using Tinto's retention rate theory as the theoretical foundation, data were collected from freshman who were enrolled in the years 2005 to 2008. Results showed gender and first-generation status were significant predictors of STEM completion and time taken to complete the degree. Institutional bias pl… more
Date: December 2018
Creator: Premraj, Divya
Partner: UNT Libraries
open access

Lipogenic Proteins in Plants: Functional Homologues and Applications

Description: Although cytoplasmic lipid droplets (LDs) are the major reserves for energy-dense neutral lipids in plants, the cellular mechanisms for packaging neutral lipids into LDs remain poorly understood. To gain insights into the cellular processes of neutral lipid accumulation and compartmentalization, a necessary step forward would be to characterize functional roles of lipogenic proteins that participate in the compartmentalization of neutral lipids in plant cells. In this study, the lipogenic prote… more
Date: December 2018
Creator: Cai, Yingqi
Partner: UNT Libraries
open access

Long-Term Citizen Science Water Monitoring Data: An Exploration of Accuracy over Space and Time

Description: The Texas Stream Team (TST) is one of an increasing number of citizen science water monitoring programs throughout the US which have been continuously collecting surface water quality data under quality assurance protocols for decades. Volunteer monitoring efforts have generated monitoring datasets that are long-term, continuous, and cover a large geographic area - characteristics shown to be valuable for scientists and professional agencies. However, citizen science data has been of limited u… more
Date: December 2018
Creator: Albus, Kelly
Partner: UNT Libraries
open access

Mass Spectrometry-Based Identification of Ceramic-Bound Archaeological Protein Residues: Method Validation, Residue Taphonomy, and Prospects

Description: Despite the variety of successful reports of the preservation, recovery, and identification of archaeological proteins in general, there are few positive reports regarding mass spectrometry-based identification of ceramic-bound proteins. In large part, this shortage is due to the lack of consideration for the unique taphonomic histories of such residues and, in general, methods development. Further, because negative results are rarely published, there is no baseline to which results can be comp… more
Date: December 2018
Creator: Barker, Andrew Lewis
Partner: UNT Libraries
open access

Producing a Film on Oil Spill Research for the Public

Description: The Deepwater Horizon oil drilling rig exploded on April 20, 2010, off the coast of Louisiana in the Gulf of Mexico. Following the spill, British Petroleum, leaser of the rig, set up a funding institution known as the Gulf of Mexico Research Initiative (GoMRI) to support research and understanding of the spill on the environments and peoples of the gulf. This outreach project was created alongside research of the RECOVER consortium, funded by GoMRI, to communicate what is happening within resea… more
Date: December 2018
Creator: Barnes, Emma Katherine
Partner: UNT Libraries
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