xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Description:

Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.

Creator(s):
Creation Date: November 20, 2006
Partner(s):
UNT College of Arts and Sciences
Collection(s):
UNT Scholarly Works
Usage:
Total Uses: 48
Past 30 days: 2
Yesterday: 0
Creator (Author):
Schlueter, Shannon D.

Iowa State University; Purdue University

Creator (Author):
Wilkerson, Matthew D.

Iowa State University

Creator (Author):
Dong, Qunfeng

University of North Texas; Iowa State University; Indiana University

Creator (Author):
Brendel, Volker

Iowa State University

Publisher Info:
Publisher Name: BioMed Central Ltd.
Place of Publication: [London, United Kingdom]
Date(s):
  • Creation: November 20, 2006
Description:

Article discussing the eXtensible Genome Data Broker (xGDB) and an open-source computational infrastructure for the integrated evaluation and anlysis of genome features.

Degree:
Department: Biological Sciences
Note:

Abstract: The eXtensible Genome Data Broker (xGDB) provides a software infrastructure consisting of integrated tools for the storage, display, and analysis of genome features in their genomic context. Common features include gene structure annotations, spliced alignments, mapping of repetitive sequence, and microarray probes, but the software supports inclusion of any property that can be associated with a genomic location. The xGDB distribution and user support utilities are available online at the xGDB project website, http://xgdb.sourceforge.net/.

Physical Description:

11 p.

Language(s):
Subject(s):
Keyword(s): open source | computational infrastructures | genomes | xGDB
Source: Genome Biology, 2006, London: BioMed Central Ltd.
Partner:
UNT College of Arts and Sciences
Collection:
UNT Scholarly Works
Identifier:
  • ARK: ark:/67531/metadc77169
Resource Type: Article
Format: Text
Rights:
Access: Public
Citation:
Publication Title: Genome Biology
Volume: 7
Issue: 11
Pages: 11
Peer Reviewed: Yes